Oncorhynchus nerka (sockeye salmon): 115102051
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Entry
115102051 CDS
T07952
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115102051
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
115102051
NCBI-ProteinID:
XP_029477432
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All DBs
Position
LG20:5948579..6169690
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AA seq
1648 aa
AA seq
DB search
MSKVIQKKNHWITKVTECAVSRDARGELNVELRGGAENGEFPYIGEVREDVLVHKNGQLS
EGELLLEVEGLSVSGLPLYDVLIVTNRCKGPVRLKTVRQGNKLNKDLKHYLSLRFQKSSP
DHELQQTIRANLYHHAMPCTTRPPRDGEVPGVDYNFLSVEDFLNLEQSGTLLEIGTFEGN
YYGTPKPPRQPVVGTVILSDAVLLNGPPGSQQSTPKRTKSYNDMQNAQVGPADYEDDDQA
TEMNNSFTGSLVRSLFPSPLLCTGNPSDQDESCGGVLRPYPARENAPSYGLNNVAASTSD
SGQQTHAQPQASPEDPLGPLPGNWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKPLKPLE
ECEDDEEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVEAKRRMQLE
QQQPQPPEGERYIREWIEEHSSAGAPLAVYASNHLETYRDPQDPPPLPPPPGGTKRGKPF
FTRNPAELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDV
IVSVNDIIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDK
EPIIVNGQQSYDSPSSHGSQTGGPINGMREPRALSPSAEVASNGSHGYSSSDVVTLASSI
AGQPELITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRNVQ
NMTHNQVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLVQQLERKDSQSSSQHSVCSHRST
HTDSPSHPSSNMPSEAVGPPPAAPTHLLPGLPPLPTHDPGDGTMTLQKKPDPFKIWAQSR
SMYESRQPDCQEQEIFLWRKDTGFGFRILGGNEAGEPIYIGHIVKYGAADEDGRLRSGDE
LICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSSGYGVGKGEGDVPPSPASSHHS
STQAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPAALQPYDMEIQR
GENEGFGFVIVSSVSRPDAGTTLAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILSVN
GCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTATES
RNNSKLKQAPPPTQALPSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDGAA
GRNGKMRVGDEILEINSESTKNMKHARAIELIKNGGRRARLVLKRGDGSVPEYDASHDGH
SPTPGAQDSPQVRTLPPNSRYHTSSESSYPPDLHKPSRHEDAGQDRDRDRMEHSGRHFNH
HHHHTWNNNHTNSRQHSPDNSTSGGNNKKSLGRKFKKSDSESGISKLLKTLRKDSSGKKA
AAAAAEKEQERSASSSTLDQRYGRSRRGSLDRSPTRKRNTSPDRRRAKSMDRRAERAHRD
CTPEREYDDGGFLSHAATPERPLYDRRLLREPQTPGRAYMETTTPERPNNGASSLSLSRD
RTTDMKATTPERPNNGASSLSRSRGRTPDRGSLKNDNLLRDSSAETRDESYGINGTPERR
YRSERDSSPNSSSSREELNYAAAPAPRLKDYYSTLKNNSSAHHNAGYNNAGLSNKAGQHH
NNAVGRAPNQFPEPKRRFYKESPKDLSI
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtaattcagaagaaaaaccactggatcaccaaagttaccgagtgcgctgtg
agtcgggatgctcgcggggagctgaatgtggagctgcgcggcggtgcggagaatggagag
tttccatacatcggggaagttagagaggatgttttggttcataaaaacggacaactgtct
gagggggagttactgctggaagttgagggtttgtcggtgtctggattgccactctatgac
gtcttgattgtgacgaatcgttgcaagggtcccgtcaggttgaaaactgtccgacaaggt
aacaagctgaacaaggacttgaagcactacctgagcctgaggtttcagaagtcctcccct
gaccatgagctccaacagaccatcagagctaacctctaccaccatgctatgccttgtacg
acacgcccccctcgagacggggaggtccccggggttgattacaacttcctgtctgtggag
gacttcttgaaccttgagcagagtggaacactattggaaataggaacgtttgaaggtaac
tattatgggacgcctaagccgccgaggcagcccgtggttgggacagtgattctcagtgat
gctgtgctcctcaacggccctccaggctcccagcagtccactcccaagcgcaccaagtcc
tacaatgacatgcaaaacgcccaagtaggacctgctgactacgaggatgacgaccaggcc
acagaaatgaacaacagttttacaggatccttagttcgtagtctcttcccctctcccttg
ttgtgcacaggtaaccctagcgaccaggacgagagctgcggcggtgttctacggccgtac
cccgcgcgcgagaacgctccgtcctatggtctgaacaacgtggccgcatccacctcggac
agcgggcagcagacacacgcccagccccaggcctccccagaagaccccctaggacccctg
ccaggcaactgggagatggcttacaccgagaacggagaagtctactttatagaccacaac
acaaagaccacatcgtggatcgaccctcgctgtctggagaaacctctaaaacctctggaa
gagtgtgaggatgatgaagaaggggtccatacggaggaaccggacaatgagctagagctg
cctgctggatgggagaagatagatgacccagtgtatggggtttactacgtagatcacatc
aacaggaagacccagtatgagaaccccatagtggaggctaaacgcaggatgcagctggag
cagcagcagccgcagcctcctgaaggtgagcggtacattcgagagtggatagaggaacac
tcctcagctggtgctcccctggccgtctatgccagtaaccacctggagacataccgtgac
ccccaggacccgcccccactgccccctcccccgggagggaccaaacgagggaagccgttc
ttcacacggaacccagcagaactgaacggtaccttcatcaacaccaaactgaagaagagc
cgccgtgggttcggctttaccgtcgtcgggggcgatgagccggatgagttcctccagatc
aagagtcttgtcctggacggtcctgctgctgtggatgggaagatggagacaggtgatgtc
atagtaagtgtgaatgacatcatcgtgcttggctacacccacgcccaggtggtgaagatc
ttccagtccatcccgatcggctccatggtggacctggccctgtgccgcggctaccctctg
ccctttgaccccgacgaccccaacaccagcctggtgacctccgtggccatcctggacaag
gagcccatcatcgtcaatggccagcagagctatgactccccgtccagccacggcagccag
accggaggccccattaacgggatgagggagccgcgggccctcagcccctcggcggaggtg
gcgtccaacggctcacacggctactcctccagcgacgtggtcaccctggcgtcgtccatc
gccgggcagcccgagctgatcacggtgcacatggagaagggcgataagggctttgggttc
acaatcgctgacagcttgacgggtgggggtcagagggtgaagcagattgtggactacccc
cgctgcaggggcctgaaggagtcagacattctgatggaggtgaacaagaggaacgtccag
aacatgactcacaaccaggtggtggacctgctcagcaagtgtcccagaggcagcgaggtc
accatgctggtgcagagaggagtggtgccagccaagaggagccccaagctggtgcagcag
ctggagaggaaggacagtcagagcagctcccagcacagtgtgtgcagccatcgcagcacc
cacacagactctcccagccacccctcctccaacatgcccagtgaggccgtaggcccccct
ccggccgcccccacccacctgctgcctggcctgcctcccctgcccacccatgaccctgga
gatggtaccatgaccctccagaagaagccagaccccttcaagatctgggcccagtccagg
agcatgtatgagagcagacagccagattgccaggagcaggagatcttcctgtggcggaag
gatacaggttttgggttccgcatcctgggaggaaatgaggctggagagccgatctacatt
gggcacatagtgaagtatggagctgcagatgaggacgggcgtctgcgttcgggggacgag
ctcatctgtgtggacggcacggcggtggtgggcaagtctcaccagctggtggtgcagctg
atgcagcaggccgccaagcagggccacgtcaacctcactgtccgacgcaaaagctcagga
tacggagtgggtaaaggggagggtgatgtgcccccatccccggcctcgtcgcaccacagc
agcacccaggccccctccctgaccgagggcaagcgaaccccccagggcagccagaactcc
ctcaacacagtcagctccggcagtggctccaccagtgggatcggcagtgggggaggaggg
ggctccggcagtgctgtggtccccgcagccctgcaaccatatgacatggagatccaacgc
ggagagaacgagggcttcggattcgtcattgtgtcgtcggtctccaggcctgatgccggg
actactttggctggaaatgcatgtgtggccatgccccacaaaatagggcgcatcatcgag
gggagccctgcggaccgctgtgggaaactgaaggtgggcgaccgcatcctgtccgtcaac
ggctgctccatcaccaacaagtcccactcggacatcgtcaacctgatcaaggaggctggg
aacaccgtctctctgaggatcattccgggtgacgagtcctccaacgcgtctctgttgacc
aatgctgagaagattgccaccatcaccaccacgcacacaccccaaactgccacagagtct
cggaataactcaaagttgaaacaggctcctcctccaacacaagctctgccctcacaggat
gcagagttctactctgtggatctggagcgggacagtaaaggctttgggttcagcctgaga
ggaggacgggagtacaacatggacctttatgtgttgaggctggctgaggacggggcagct
ggcaggaatggcaagatgagggtgggagatgagatcctggagatcaacagcgagagcaca
aagaacatgaagcacgcacgcgccatcgagctgatcaagaatggtggccggagggcacgc
ctggtcctcaagaggggcgatggatctgttcctgaatatgacgccagccatgacgggcac
tctcccacacccggggcacaagactctccgcaagtgagaaccctgccaccaaacagccga
tatcacacctcatcggagtccagttatccaccagaccttcacaaaccatcacgccatgag
gatgctggacaggaccgagacagggacaggatggagcactcgggccggcactttaaccac
caccaccatcacacctggaacaacaaccacaccaactccagacaacactccccggacaac
agcaccagcggcgggaacaacaagaagagtcttggccgcaaattcaagaagtctgactcg
gagagcggcatctcgaaactcttaaagactctgcgcaaggacagctctgggaagaaggct
gcagctgcagcggcggagaaagaacaagagcgctccgctagtagcagtactctggaccag
agatatggtcgatcgcgccgcggctccctcgaccgctcgcccacccgtaaacgcaacact
tcccctgaccgacggcgggccaagtccatggaccgcagggcagagcgagcacaccgggac
tgcacacctgagagggagtatgatgacggagggtttctcagtcatgcagccactcctgaa
cgaccactctatgaccgtaggctcctgagggaaccacagaccccaggcagagcctacatg
gagaccaccaccccagaacgccccaacaacggggcctcctccctgtctctctccagggac
cgcacgactgacatgaaggccaccaccccagaacgccccaacaatggggcctcctccctg
tctcgctccaggggccgtacgcccgacagaggcagcctgaagaatgacaacctcctgagg
gactcgtcggccgagacgagggatgagagctacgggataaacggaacaccagagagacgc
tacaggtcagagagagactcatctccaaacagcagctccagcagggaggagctgaactac
gctgcagcgcctgctcccagactgaaggattactacagcacactgaagaacaactcctcc
gctcaccacaacgccggctacaacaatgcaggacttagcaacaaggcaggacaacaccac
aacaacgcagtaggccgtgccccgaaccagttcccagagcctaagagaaggttttacaaa
gagagccccaaggacctcagcatctga
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integrated database retrieval system
