Oncorhynchus nerka (sockeye salmon): 115102096
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Entry
115102096 CDS
T07952
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
one04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115102096
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115102096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102096
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115102096
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115102096
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
115102096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115102096
NCBI-ProteinID:
XP_029477529
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Position
LG20:complement(7965509..7979666)
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AA seq
411 aa
AA seq
DB search
MSPLWSSNCSVVSLSRPTLHSKSPTYTDPSTLLYIDCRVCGDTASGFHYGVHACEGCKGF
FRRTMRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLLVGMSRDAIRFGRMPQEEREKLL
AEFMDVSPRSPESADLRALSRQLCLSYHRHFPLTKSRARAILSGKSHGNSPFVIHDMKSL
TAGQDFINSRQFPFLEHQRSVLPPQESAGELELFFFRQVQFRTAEAVREIIEFAKSIPGL
TELDINDQVTLLKYGVIEVMLIMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEMMEP
KFEFAVKFNVLELDDSDTALFLAVIILSGDRPGLVNVKPIEDLQEAVLQALELQLKTIHP
DCPQLFARLLQKMTDLRPLVADHVRLIHLLKKQELETCLHPLLQEIMRDLY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctctttggtctagcaactgtagcgttgtcagcctgtccagacccactcttcac
tccaagtcccccacttacacagaccccagcactctgctctacattgactgcagagtgtgt
ggggacacggcctcaggcttccactatggagtccatgcctgtgagggctgcaagggattc
ttccgaagaaccatgaggttaaaactggtgtatgaccactgtgatctgcattgtcggatt
cacaaaaagagccggaataaatgccagtactgtcgctttcagaaatgtctgcttgtgggc
atgtcacgcgatgccatccgcttcggccggatgccccaggaggagagagagaagctgctg
gctgagtttatggatgtgtcccccaggagcccagagtcagcggacttgagagcattgtcc
agacagctgtgtctgtcctatcacagacactttcccctgaccaagagcagggccagagcc
atcctgtctgggaagagccacggaaactcaccatttgtcatccatgacatgaagtccctg
acagcgggtcaggactttataaacagtagacagttccctttcctggagcaccagaggtct
gtcctgccccctcaagagtctgccggggagctggagctcttctttttccggcaggttcag
ttccgcaccgccgaagctgtacgagaaatcatcgagtttgccaagagtatccctgggtta
acagagctggacataaatgaccaggtgaccctgctgaagtacggggtcatcgaggtcatg
ttgatcatgctggcgccgctgatgaacaaggacggcacactgttcgcctacggacagatc
ttcatgacccgggagttcctcaagagtctgaggaagcccttctgtgagatgatggagcca
aagtttgagtttgcggtaaaattcaacgtgctggagctggacgatagtgatacagcgctc
ttcctcgctgtcatcatcctcagtggagaccgtccaggcctggtgaatgtgaagcccatc
gaggacctccaggaggcagtactgcaggccttggagctgcagttgaagaccatccaccca
gactgcccccagctgtttgccaggctgctgcagaagatgaccgacctgcggccgctggtg
gctgaccacgtccggctcatccacctgctcaagaagcaggagctggagacgtgtctgcac
cccctactacaggaaatcatgagggacctgtactag
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