Oncorhynchus nerka (sockeye salmon): 115102114
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Entry
115102114 CDS
T07952
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115102114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115102114
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115102114
GBAF(ncBAF) complex
115102114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
115102114
NCBI-ProteinID:
XP_029477564
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All DBs
Position
LG20:complement(8431262..8455813)
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AA seq
517 aa
AA seq
DB search
MSLCRIVCVTCILILWILLLALLFVYVLCFRHIIYVTLCCHFDRNKKCACSLHSALLHLT
SPPIHTPNICSGIYPSHQQQSIGMLDENHHLIQCIMDYQNKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPMGSMGPGGMGQNGGSGPIHSQSNLNDAMTPGLPPPSMMQ
SQMSNGPSHAPMQQQQQHADQTQSAGPSSTSLSLPASTHSSALGYSHPVPPSSQGSMIQG
PGPSPGYGSSSSSSSRSNLNMQSNPVSMMQQPHYPSSQTGAGQQHYQGQQTAMGMLGQSG
QGNSMVSQRPMGTYRPTQQGCALQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHAEYSY
QQSSYGEQGYERPFDESSQHYYEGGNSQYSQQQAQYQHGSGQQQPFSQQQYPSQQGYSTQ
QQGYGPGQGASSQYSQYQQGQGQQYSSYRSSQAAPGAQTQRPYAYEQVQLPLTPRFEEDG
AVQPNIGVNMETTSNKAPPPGQTGGQVRQGNSSVNAP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtgtagaattgtttgtgttacgtgtattttgatattgtggatattgttactc
gcattactttttgtctatgttctgtgttttcggcatattatatatgttactttgtgctgt
cattttgaccggaataaaaagtgtgcctgttcactacactctgctctcctgcacctgact
tcacctccaatacacactcctaacatctgctccggcatttatcccagtcatcagcaacag
agcattgggatgctggatgaaaatcaccatctgatacaatgtataatggattaccagaac
aaaggaaaaacagcagaatgcacacagtatcagcagattcttcacagaaacctggtctat
ctggccacgatagcagattctaatcagaacatgcagtcactgttacctgcgcctcctacc
cccatggggagtatgggtcctggagggatggggcagaacgggggcagtgggcccatacac
tcccagagcaacctcaacgacgccatgacacctggcctgccccccccctccatgatgcag
agtcagatgagcaatggccccagccatgctcccatgcagcagcagcagcagcatgcggat
cagacacagtcggctgggccctcctccacgtccctcagcctgccggccagcacccacagc
tcagccttgggctacagccaccccgtgcccccctcttcccagggcagcatgatccagggg
cctggcccaagcccaggctacggttcttcctcttcttcctcctcccgcagcaacctcaac
atgcagtccaacccagtctccatgatgcagcagcctcattacccgtcgtcccagactggg
gccgggcagcagcactaccagggccaacagactgctatgggcatgttggggcagagcgga
caaggcaacagtatggtgagccagaggcccatggggacttaccgacccacacagcaggga
tgtgcactgcagtacatgggacaagacgagttctacggagagcagtatggacacactcag
agctccagtgagcccataaaccagcagtattaccccgatggtcatgccgagtactcctac
caacagtcgtcctacggcgaacagggctatgagaggccctttgacgagtcctcacagcac
tactacgaaggaggcaactcccagtacagtcagcagcaagcccagtaccagcatggctca
ggtcagcagcagcccttcagccaacaacagtacccctcacagcagggctacagcacacag
caacagggctatggtccaggtcagggtgcgtcgtcccagtactcccagtaccagcagggt
cagggccagcagtatagctcctaccgctcctcccaggctgcccctggggcacagacacag
aggccctacgcttacgaacaggtacagctacccctgaccccacgttttgaggaggacggt
gctgtccaaccaaacattggggtcaatatggaaactaccagcaataaggcaccacctcct
gggcaaactggtggacaggttaggcaagggaacagttctgtgaatgccccttaa
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integrated database retrieval system
