Oncorhynchus nerka (sockeye salmon): 115102143
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Entry
115102143 CDS
T07952
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 6-like isoform X1
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00512
Mucin type O-glycan biosynthesis
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
115102143
00514 Other types of O-glycan biosynthesis
115102143
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115102143
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
115102143
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
Mucin-type
115102143
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
RicinB_lectin_2
Glyco_tranf_2_2
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
115102143
NCBI-ProteinID:
XP_029477618
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All DBs
Position
LG20:10006302..10012166
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AA seq
622 aa
AA seq
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MRVFSRRHTLPFKLAILAGSLFLVLLLVMQYDVGGGTSPEPWLRELSIKQSQVMGVVRGA
VSNMGFQIGAPLPLPSERGTNSFDPRCPPGFYSIDELQPHLERPLQDPKDHGAYGRPFVM
GRMTPAEIKEKQDGLTKNCFNQFASDRISLHRSLGNDTRHPDCAGQRFRRCPPLPTTSVI
IVFHNEAWSTLLRTVYSVLHTAPASLLTEILLVDDASTDDHLKSRLDEYVLQLKIVRVLR
QRERKGLITARLLGAQTAQGEILTFLDAHCECFNGWLEPLLARIVEKPTAVVSPEIVIID
QNNMKFAKPLATARARNRGNFDWSLVFGWEQIPEEDQKKRKNETYPVRTPTFAGGLFSIS
KTYFEHIGTYDDKMLIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRSKSPHTFPKGRS
VIARNQVRLAEVWMEDYKQIFYRRNKKAATIAKENTYGDISERLKLKEKLSCKNFTWYLH
NVYPEAYVPDLTPVMFGALKNSGSKTCLDVGEKNKGGKPIILYTCHNMGGNQYFEYTSHQ
ELRHNIRKQLCLHATPGAAPVSIKLCRLKGKGTTVAPEQVWHFTPGSLLKNPSSGKCLTV
DGGEVVMSSCDLANVSQHWNLS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgttctcccgccgtcacacccttccctttaagcttgccattctagcaggctcc
ctcttcctggtcctactgctcgtcatgcagtacgacgtgggaggtgggacttcccctgaa
ccctggctcagagagctgtcgatcaaacagtcacaggtgatgggtgtggtcagaggtgct
gtgtcaaacatgggcttccagattggtgcccccctgccccttccctcggagcgtgggacc
aactcctttgatccccgctgtccacctgggttctacagcatagatgagcttcaacctcac
ctggagaggccactacaggacccaaaggaccacggagcatacggccgaccgtttgtgatg
ggcaggatgacccctgcagagattaaagagaagcaggatgggctgaccaaaaattgtttc
aaccaatttgccagcgaccgtatctcccttcaccgcagcctgggaaatgacacacgccac
ccagattgtgcaggtcaaaggttccggcgctgccctcctctccccaccaccagtgtgatc
atcgtgttccacaacgaggcgtggtccaccctcctgcggaccgtttacagcgtcctgcac
actgctcctgcctccttgctcacagagatattactagtggatgacgctagcacagacgat
cacctgaagtctcgtctggatgagtatgtcctgcagctgaagattgtgcgtgtgctacga
cagcgggagaggaagggattaatcactgccaggctactgggggcacagacggctcaagga
gagatcctcaccttcctggatgcccactgtgagtgcttcaatggctggctggaacccctc
ctggctcggatagtggagaagcccactgctgtggtcagccctgagatagtcatcattgac
caaaacaacatgaagttcgccaaacccctcgccacagctcgtgcccgtaaccgtggaaac
tttgactggagccttgtctttgggtgggagcagatccctgaggaagaccaaaagaaacgc
aagaatgaaacttatcctgtcaggactcctacctttgcaggtggtctgttctctatttct
aagacttactttgagcacattgggacctatgacgacaagatgttgatctggggaggtgag
aatgtggagatgtccttcagggtgtggcaatgtggaggccagctggagatcataccctgc
tcagtggtgggacatgtattccgcagtaagagccctcacaccttccccaaaggcaggtcg
gtgattgcccgcaaccaggtgcgtctagccgaggtctggatggaggactacaagcagatc
ttctaccgcaggaacaagaaggctgccaccatagccaaagagaacacatatggtgacatc
tctgaacgcctcaaactcaaagagaagctaagctgcaaaaactttacatggtacttgcac
aacgtttacccagaggcctatgttccagacctcacccctgtcatgtttggagcgctcaag
aactctggctcaaagacatgcctggatgtgggagaaaagaataagggtgggaaaccgatt
atcttatacacatgccacaacatgggaggaaaccagtattttgagtacacatcccatcag
gagcttcgtcacaacatacgtaagcagctgtgtctacatgcgacccccggggcggcgccg
gtgtccataaagctctgtcgtctgaagggcaaaggaaccacagtggccccggagcaagtg
tggcattttacaccgggttctctccttaagaatccctcctcgggcaaatgcttgactgta
gacggaggtgaagtggtgatgagtagctgtgacttggccaatgtcagccaacactggaac
ctcagctga
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