Oncorhynchus nerka (sockeye salmon): 115102155
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Entry
115102155 CDS
T07952
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115102155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115102155
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115102155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
115102155
NCBI-ProteinID:
XP_029477638
LinkDB
All DBs
Position
LG20:complement(10324633..10336632)
Genome browser
AA seq
1542 aa
AA seq
DB search
MEIWPCGNPNPIKVLQSSFYKMMGGSESGSGDKDGVHTVAIQVPIGWQRRAKDGLVVYVS
PSGTVLSSLEEVKSYLLTDGTCKCGLECPLVIHKVFNFSLGVQIQQHSQPVGKAEQDMTK
LCNHRRKVVAMAALCRSMQASQLPYVARHTEVTSGIMENRDPKRMRVDREEKERGTYTSK
HHLVQSRPNNNLHPNSCGSPKNSPQLVYSYNGSSPLSHNSTNSYHTPDILRRLPPPLNLP
PNTSPFSSYGAPQRSPRTPTPQNLSQGQRAPQTPEALRSPHMGPLSPPPPSSPGTLGRGG
QSHQHGIIVGSPLSPSCSPSPSVSMNCPSPRQRSRHPSASSAHSEQGVVLGGYPPRRISS
SSSHSPIPGGSPILHFSKYKLEDILEQFKNSGNSSTNNHILHPNSLSNQNNPHILSLALE
KVGMPTKAPASASGMEISAGPSGLPLGKFLNHQKQPHPASFPASSLLSAAAKAQLASQMI
HNQSSNSRSILNSALSLEVSRESKQLKVTNSTLHNSLPSIARPLSAASPLLSLSQPLASS
PLHLSRTDRTSHRKRQRRSPTVLSMLKESQMTGPRTPGDVLNLSSHSQPSSTSASPYPAM
LENHIQALRLSVRHSGTLAGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSVQNAQA
TGAQPGSGHCTGGMRQSPRQSPSPSHLNIRPFPVQSPTNHSTTQGPSQPLSPSQSKSRRG
NAQSPSRPHTRTSPKQRRSPSMALSNAQSAQYCSSPSPTPHTPNRLWQAQNQPMDATTIQ
SPIGQAFPEVSESMEMESMSTLGPGLNSTSTSNHSSSVTSYSSTTSPRPLDLSNHMLALL
AASSTTPLGEGCLDRTTGNNTTGVQEPQSVDLQGSTVTKPPGGCSPQALGDSTCSLPLAE
AFPFMSQEQLLQLLSATAGLPSLLDPTILGSLPLGLWIGGQQGHLPISNTPQQHQLPDQQ
LLQQSEQQLLLQHEQQQKQHQIAHLNHNFPFSLFPCLMGGQGELPLNLLGLLNPLLPPSA
APTPGQECDLGMGEKLGLQALLMASLLLGQQQTAMLPLSGLGQLSLDLPFRQHIPALLDG
LSLDKGSGLLDPSSLPGPGLLEALQGLLPPADGHLQALQSLLLSTPLPPPAFLSLSPDLL
NAALGSTGLPPAPHLPLTQQPPPQVSASGHDGGMETLIPLSVQGKDNPVLHQLLPTLLNP
GVLGDLSALTSLHSLLGLGAGPLFLPPVQASALGMPLLQGPDGAMNLLNNIQLNMAPPSE
GEKPISLQETDSSSLQEDIPANRLTPETAPSPCPALAPVSQRGEGSMVSVLDPYASFMDT
IYTSFLQVSAKEQEAVQSGTDAFGALPPSYPGERRSPSALLPQVSAPLSLSPRQACTLRN
LDLSRLNMEAAHSPAQGTPKPINDGSNTPPQNKLEFPECHTNPPLLPIYLEEAKTDSYSQ
AVSNRQGDRPQAGRYQSPRDGSSCPKEETGGLQHTEQGRNQTAQMGGARRGRKRKQTLQN
VLEDFRELDSPALEEPKPRVVLLKPERSVRGRRRRGARSQRQ
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggccgtgtgggaaccccaaccctataaaggtgctgcaaagcagtttttac
aaaatgatgggaggcagtgagagtggcagtggagacaaggatggagttcacactgtggca
atacaagtccccattggctggcagaggagagcgaaggacgggcttgtggtgtatgtcagt
ccaagtggcacagtcctgtcctcactggaagaggttaagtcatatctgttgaccgatggc
acatgcaagtgtggcctcgagtgtccgctggtcatccacaaggtgtttaactttagccta
ggggtccaaattcaacagcacagccagccggtggggaaggcagagcaggacatgacaaag
ctctgtaaccatcggaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggct
tcacaactgccctatgttgcccgtcacacagaggtcaccagtggcattatggagaacaga
gatcctaagaggatgagagtggacagggaagaaaaagaacgtggcacttacacctccaaa
caccatctagtccagtccaggcccaacaataacctccaccccaactcttgtggcagtcct
aaaaattctccccaacttgtgtattcttacaatggctcctcacccctctcacacaatagc
actaactcttatcacacgcctgatattttgaggagactgccacctcctctcaatctcccc
cccaacacctctccattctccagctatggggcacctcagaggtccccacgcacaccaacg
cctcagaatctcagtcagggtcagagggcaccacagactccagaagccctcagatctcct
catatggggcccctctctccccctcctccctcctcccctgggacactgggcaggggaggg
cagagtcatcaacatggtatcatcgttgggtctcccctgtccccctcatgttccccctct
ccctctgtgagtatgaactgcccctctccccgccagcgctcacgccacccctccgcctct
tctgctcactctgagcagggggtggtgcttggtggctacccccccagaaggatatcctct
tcctcctcacactctcctataccaggggggtcccctatcctccatttctcaaaatacaag
cttgaggacatcttagagcagtttaagaactctggcaacagtagcactaataaccacatc
cttcacccaaactcactgagcaaccaaaacaatcctcatatcctctctctagctcttgaa
aaggttgggatgcccacaaaggcacctgcttctgcctcaggcatggagatcagtgctggt
ccttctggtttgcctcttggaaagttcttgaaccaccagaagcaaccccacccagcttct
tttcctgccagcagtctcctctcggcagcagccaaggcccagctggccagccagatgatt
cacaaccagagctccaattcgcgcagcatcctcaactcagccctctctttggaggtctcg
agggagtctaagcaattgaaggtaacaaacagcactttacacaacagccttccctcaatc
gctaggcccctgtctgcagcctctcccctgctttccctctcccagcccctagcctccagt
ccccttcacctctcccgtacggaccggacatcccacaggaagcggcagcggcgttcgccc
acagtgctcagcatgctgaaggagtcccagatgaccggtcccagaacccccggcgacgtt
ctcaacctctcctcgcactctcaaccctcctctacctcagcctcgccctaccccgccatg
ttagagaaccacatccaggccttaaggctctcagtccggcactctggcacactcgcaggg
ccccagaagcagcctgacggcgccctggatttcacaacaatcatggcaggtcaaccggat
ccccccacccagcctctctctgctctgcttcacctgctcagtgtgcagaacgctcaagcc
actggagcccagcccggctctggacactgcacaggaggcatgaggcagagccccaggcag
tctccctcgccctcccatttaaacatcagaccattccccgtgcagtcccccactaatcac
agtaccacacaaggcccatcacagcccctctctccctctcagtcaaagtccaggcgaggt
aatgcacagtctccgtctcgaccacatacgaggactagtcccaaacagagacggtctcct
tccatggccctgtccaacgctcagtcagcacaatattgcagtagcccctcgcccacccca
cacacccctaataggctgtggcaggcccaaaaccaacctatggatgccaccaccatccag
tcacccattggccaggcctttcctgaagtcagtgaatcaatggagatggagagcatgtca
acactaggccctggtctcaacagcacctccacctccaaccatagcagcagcgtcaccagc
tacagcagcaccacctcccccagacccctggatctcagtaaccacatgctggcactgctg
gcagcctcttccaccacacctcttggggaggggtgcctggacagaaccaccggcaacaac
actacaggggtgcaagagcctcagagtgttgatcttcagggttccacagtgaccaaaccc
ccgggaggctgcagcccccaggccctgggggattccacttgctccttacccctggctgaa
gccttccccttcatgagtcaggagcagcttctccagcttctatctgccacggccggcctg
ccctccctcctggaccccaccatcctgggctctctgcccctgggcctgtggattggcggt
cagcagggtcacctccccatctccaacacacctcagcaacaccaactgcccgatcaacaa
ctactacaacaatcagaacaacaactattgttacagcatgagcaacagcagaaacaacac
cagattgcccatctgaaccacaactttccatttagcttattcccctgtctaatgggaggt
cagggagagctgcctctgaatctcctgggtctgttgaacccattgctacccccttctgct
gcccctaccccaggccaggagtgtgatctggggatgggggagaaactgggcctccaggct
ctcctcatggcctccctgctactaggccagcagcagactgccatgttgcccctgtctggg
cttggccagctgagcctggacctccccttccggcagcacatcccagccctgttggacggt
ttgtctctggataaagggtctggactcctggacccgtcatccctccccggccctgggctc
cttgaggccctccagggcctgcttcccccagctgatgggcacctccaggccctgcagtcg
ctcctgctctccacccccctgcctcccccggccttcctttccctcagccctgatctgcta
aatgctgccctgggctctactggcctcccgcctgcccctcatctccccctaactcagcaa
cccccacctcaggtctcagcttcaggccatgatggggggatggaaactctaatccccctg
tctgtccagggaaaggacaaccctgtcctccaccagttactgcctactctcctcaaccca
ggggttctaggagacctgtctgctctgaccagccttcacagtcttctggggctaggtgca
ggccctctcttcctgcctcccgtacaggcctctgccttgggcatgcctctgctccagggc
cctgatggggccatgaacctcctcaacaacatccagctcaacatggcaccaccctcagag
ggagaaaaaccaatctccttacaggaaacagacagctcctcccttcaggaggatattcca
gccaatcggcttaccccagagactgcgcccagcccctgtcccgccctggcccccgtgtcc
cagcgtggagagggctccatggtgagcgtcctggacccctacgcttccttcatggacact
atctacacctccttcctccaggtcagtgctaaagagcaggaagcagttcagtctgggacg
gatgccttcggtgccttaccgccctcctaccctggggagcgccgttccccctccgctctc
ctccctcaggtcagtgcccccctctccctgagccctcggcaggcctgcaccctgaggaac
ctggacctgtcccggctcaatatggaggcagctcactccccggctcagggcacccctaaa
cccatcaacgatggctccaacacgcccccgcagaacaagttggaattcccagagtgtcac
actaaccctcctctgcttcccatctacctggaggaagccaagacagactcgtacagccag
gctgtgtcaaatcggcagggggacagaccccaggcaggacggtaccagagtcccagagac
gggagcagctgccccaaggaggagactgggggtctacagcacacggagcagggcaggaac
caaactgcacaaatggggggagccagaagaggcaggaaaaggaaacaaacgctacagaat
gtgctagaggacttcagagaactggattctccagccctagaggaacctaaacccagggtg
gtgctgctgaagcctgagaggtcggtccggggcaggaggcggcggggagccaggtcccag
agacagtga
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integrated database retrieval system
