Oncorhynchus nerka (sockeye salmon): 115102163
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Entry
115102163 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115102163
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115102163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115102163
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115102163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
DbpA
Motif
Other DBs
NCBI-GeneID:
115102163
NCBI-ProteinID:
XP_029477655
LinkDB
All DBs
Position
LG20:10641882..10647843
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AA seq
335 aa
AA seq
DB search
MPRIYVGKLNYNAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYGGGGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKI
RLVEEKSRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSHSRSHSRSKRRHSKSGRK
SRSRSRTRKSRSRSNKSKSRSKSCSKVKSERDSRSRSKEKSANKKSRSRSASPVKNGKEE
RSSRSPSPAADRRSKSPDKRSVSRSKSRSRSASRD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatctatgttggaaaacttaattataatgctcgagaaaaagaccttcaaaga
tttttcaatggctacggaaagcttatggaaattgatctgaaaaatggatatggctttgta
gaatttgaggataatcgcgatgcggacgacgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgccagaggaccgcgccgtgaccgagatggatat
ggtggtggcgggggtggtggtggtcgcagtagtagtggttacagcagcagcagaagccgc
actggcagggataagtacgggccacccgtccgtactgagtaccgactgatcgttgagaat
ctgtccagccgctgcagctggcaggatctgaaggatttcatgcgtcaggctggagaggtc
acgtatgccgacgcccacaaggagcgtaccaacgagggtgtcatcgagtttggctcacgc
tcggacatgaggagggccctagacaagctggacggcacggacatcaacgggaggaagatc
cgcctggtggaggaaaagtctcgccgccgacgctcctactctggcagtcgctctaggtct
cgcagcagacgtcgctctcgtagcaggagccgcaggagcagtcgctccaggagtaactcc
agatcccactcccgatcccattctcgaagcaagagacgccactccaagtctggaaggaag
tctcgttcccgctctcgcacccgcaaatccagatcccgttccaacaaaagcaagtcccgt
tccaagagctgctccaaggtgaaatccgagcgggattcccgcagccgctccaaggagaag
tcggccaacaagaagtcccgtagccgatcagcatctcccgtgaaaaatgggaaggaggag
cgttcctctcgctccccttccccagcagctgaccgtcgctccaagtctccggacaagcgc
tcagtctcccgctccaaatccaggtctagatcagcttcccgagattaa
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