Oncorhynchus nerka (sockeye salmon): 115102183
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Entry
115102183 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ARIH2-like
KO
K11969
ariadne-2 [EC:
2.3.2.31
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115102183
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
115102183
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
115102183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
IBR_2
zf-RING_2
UBA_ARI1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
DUF4637
Motif
Other DBs
NCBI-GeneID:
115102183
NCBI-ProteinID:
XP_029477685
LinkDB
All DBs
Position
LG20:complement(11364507..11374058)
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AA seq
507 aa
AA seq
DB search
MSVDMNSQASDSNEDDFGVNSEEDEDDDGGDDEDQGDIVDYYDGVAGDMEQQGXDSFDPE
EYQFTCLTYSEIQKVLCKEVNSIAAILKVLPAVAKLVLVHFHWQVSQILDRYKSNSSQLL
SEAQVQPSSTCRSVPTPQSLQCGVCLQLVRRDALLALPCQHSFCKTCWEQHCTVLVKDGM
GVGISCMAQDCSLQMPEDFVLPLLPGEELKDKYRRYLFRDYVESHFQLQLCPGADCPIVI
QVQEPRARRVQCIRCNEVFCFKCRIMYHAPTDCPTIRRWLTKCADDSETANYISAHTKDC
PKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQ
AREALKKYLFYFERWENHNKSLQLEAQTYQRIQEKIQERVMNNLGTWIDWQYLQNAAKLL
AKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADTYERGSEGELSA
NDRGDLENQMHIAEQRRRTLLKDFHDT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggacatgaacagccaggcctctgacagcaatgaggatgacttcggggtcaac
tctgaggaggacgaggatgacgacgggggtgacgatgaggaccagggggacatagtggac
tactacgacggtgtggccggagacatggagcagcaggggnccgactcgtttgacccagag
gagtaccagttcacctgcctcacctacagtgagatccagaaggtgctctgcaaggaggtc
aacagtatcgctgccatcctgaaggttttacctgctgtagccaaactggtccttgtgcat
tttcactggcaagtgtcacaaatactggacagatacaagtccaactcatctcagttgctg
tctgaggcccaggtccagcccagcagcacctgcagatcagttcctactcctcagtccctc
cagtgtggggtgtgtctgcagctggttcggagggatgccctgcttgcgctgccctgccag
cactccttctgcaaaacatgctgggagcagcattgcactgtactcgtcaaagatgggatg
ggagtgggtatctcctgtatggctcaggattgttccctccaaatgccagaggactttgtg
ctcccgctgctgcctggtgaggagctgaaggacaaatatagacgctacctcttcagggac
tatgtggagagccacttccagctgcagctgtgtccaggggcagactgtcccatcgtcatc
caagtgcaggagccacgggcccgcagagtacagtgcatccgctgcaatgaggtcttctgt
ttcaaatgccggatcatgtaccacgccccaacagactgcccaaccatccgaaggtggcta
accaaatgtgcagacgattcagagaccgccaactacatcagtgcacacactaaagattgt
cctaagtgcaatatctgcattgagaagaatggaggctgcaatcacatgcaatgctccaag
tgcaaacacgacttctgctggatgtgtctgggggactggaagacccatggcagtgagtac
tatgagtgcagtcgctacaaggagaacccagacatcgtcaaccaaagccagcaggcacag
gccagagaggccctcaagaaatacctcttctactttgagaggtgggagaaccacaataag
agtctccagctggaggctcagacgtaccagcggatccaggagaagatccaagagcgggtg
atgaacaacctgggcacctggatagactggcagtacctgcagaacgctgccaagctgctg
gccaagtgtcgctacacactgcagtatacttacccctacgcctactacatggagtctggt
cctcgtaaaaaactgtttgagtaccagcaggcccagcttgaggcagagattgagaacctg
tcttggaaggtggagcgagcagacacctacgagcgagggagtgagggggagctgagcgcc
aatgaccgaggggatctggagaatcagatgcacattgctgagcagaggagacgcacgctg
ctgaaggattttcacgacacctga
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