Oncorhynchus nerka (sockeye salmon): 115102206
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Entry
115102206 CDS
T07952
Symbol
arhgef10l
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102206 (arhgef10l)
03036 Chromosome and associated proteins [BR:
one03036
]
115102206 (arhgef10l)
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115102206 (arhgef10l)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115102206 (arhgef10l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
IQ_SEC7_PH
WD40_CDC20-Fz
CFAP43_N
Beta-prop_Vps41
DUF7675
DUF6059
Motif
Other DBs
NCBI-GeneID:
115102206
NCBI-ProteinID:
XP_029477739
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All DBs
Position
LG20:12444749..12478741
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AA seq
1369 aa
AA seq
DB search
MASPPPPPPPTSVPMSNMASKMEEEEEGMKFDFDNSDEECSTTPANSVSTMAKGFEATVM
AGLASKRNTMGPSSAQDPTVKPRLNGWPSVGKEDQSMHSLPHSNSSEMAGRRSPEGRSEL
GLSGDTEGSGRRNSIYEVQAPYGATSAKEWFSVVSELTLRLHKGKPPPIPDVGGPGDAAS
PENENVSSPEGLQSPDGLACTDSPPSPTSPDNVMTDPTLRHDMTNSTSPDDIIMTSPEAI
FRTSRPEVIYDDVPCESLLSPLEDDIYEDVQRPESHHGTNNGWSDSEFESYDEQSDSETK
IPTVARSSSKLSQDMWRLKERCAKTKQDLAMRSCDFKVQMLMKAARNGTKDGLEKTKLAM
MRKVSFLQKKETAEESDDDAGYLDVMVSEVKHPPPQLSPMPKGLSTQQIIRRHIVGSIVQ
SERSYVDSLKRILVEYQKPLLEPEARILSDKKVRPIFYRLREILQCHSMFQIALASRVAE
WDLSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACISKPAFLEFLKKKQVSSP
DRITLYGLMVKPIQRFPQFILLLQDMLKNTPRAHPDRLPLQLALTELETLAERLNEQKRV
ADQVAEIQQLARSIGDRQLSKLLNSDQRQLILCEVLIETVYGEKGQVLKSKERKVFLLND
TLICANINVKGPPDISSLVPIGPKYTVKWSAPLLQTQVVEVGQESFQSKDTGKRPNVANV
PGKVFLGPPRLYQELEELQHDLYVVENITLLVGTLQGTYQNLNTTVGQDWCLALQRLIHI
KDEQIQCANKCRLRLAVPGKPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKIAKREEN
TPGWVFAEDDGKTRHPFWCPLLACRLPIFSSKTQDQKLETALHNPVQCALLAFSAASTSL
PQGYLWVASGGDRNHGQVEIFSLNRSMPRMVKSIQMGAPVLCLDHVMEPCPTEEEGEGEA
AVKSTARTGNTICIGLQDGNIHVYGTVDTSTQCLLTFSNPDSCPVLCLKHSASFLFAGLG
NGKVSVYARKSGEGLWDPDSCRLVTVGSGPIRTLLTLENAVWASCANHVTVIQGSSLHTQ
SFDAHPEPLVSVSHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRSTFLSPGQQ
GSVRVTSLLICQGLLWVGTAQGIIVTLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVVTS
STLSPDMLKRDSVCETADQANGGAGGGEGGERRNELSQESLSQPDCSSPQGEPSKAKGML
LQYRLRSTTQLPGKLLTAEPDQSPCDAPPETPEHSPEDGSIYELSEDPEVWVRGQPPARE
GRGKDKVTSAAVFSGGRGFRRLGEETIAANGDPDESTLMVWQLPLTVSP
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccaccccccccaccccctccaacctcagtgcctatgtccaacatggcctct
aagatggaggaggaagaggaaggtatgaagtttgactttgacaacagtgatgaagagtgc
agtacgacaccagcgaactctgtctctaccatggccaagggctttgaagccactgtgatg
gcggggcttgcatcaaaaaggaacacaatgggccctagttctgcccaagacccaacagta
aagccaaggctcaatggatggccgtctgttggaaaggaggaccagagcatgcattcactc
cctcattccaatagctcagagatggctggaagaaggtctcctgagggccgctctgagctg
ggactgtcaggagacacagagggctctgggagaagaaatagcatttatgaagttcaggca
ccgtatggagccacctcagccaaggagtggttcagtgtggtctcagagctcactctgcga
ctgcataaagggaaacctccccctattcctgatgtaggaggtccaggtgatgcagcaagt
cctgaaaatgaaaatgtgtctagtccagagggcctgcaaagtccagatggtctggcctgc
acagacagcccacccagccccaccagtcccgataacgtcatgaccgatccaaccctccgc
catgacatgaccaactcgaccagccctgatgacatcatcatgactagtccagaggccatc
tttaggaccagtcgtccagaggtcatctatgatgacgtgccctgtgagagcctcctctct
cctctggaagatgacatctacgaggacgtccagaggccagaaagccatcatggcaccaac
aacggctggagcgacagtgagtttgagagctatgatgagcagtcagacagcgagaccaaa
atacccactgttgcccgaagcagtagtaagctttctcaggacatgtggcgactgaaagag
cgctgtgccaagaccaagcaggatctggccatgcgcagctgtgacttcaaggtccagatg
ctgatgaaagcagcgagaaatggcaccaaggacggactggaaaagactaagttagctatg
atgcgtaaagtctctttcctgcagaaaaaagaaaccgcggaggagagtgatgatgacgct
ggttatctggacgtgatggtgtctgaagtgaagcacccaccgccccagctgagccctatg
ccaaaggggcttagcacccaacagattatcagacgccacatcgttggttccattgtacaa
agtgagaggagttatgtggactctctcaagagaatcttagtggagtaccagaagcccttg
cttgagccagaggcccggatcctgagcgataagaaggtgcggcccatattttaccggctg
cgggagatcctgcagtgccactcaatgttccaaatcgccctggcatcccgtgtggccgag
tgggacctcagtgagaagatcggagacctctttgtggcctcgttttccaagtcaatggta
ctagacgtgtacagcgactacgtcaacaacttcactaacgctatggcgctcatcaagaaa
gcctgcatttccaagccagctttcctggagtttctcaagaagaagcaagtgtcaagtcct
gacagaatcactctttatggccttatggttaaaccaatccagcgcttccctcagttcatc
ctgctgctacaggacatgctgaagaacactccccgggcccaccctgaccgcctgcccctg
cagttggccctcactgagctggagacgttggccgagaggctgaacgagcagaaacgagtc
gctgaccaggtcgctgaaatccagcagctggcacgcagcattggtgaccgtcaactgagc
aagctcttgaactcagaccagaggcagctgatactgtgtgaggtactgattgagacagtg
tacggggagaaaggacaggtccttaagtccaaggagcgcaaagttttcctgctgaacgac
accctcatctgtgcaaacatcaacgtcaagggtccccctgatatcagcagtctagttccc
attggtcctaaatacacagtgaagtggagtgcccccttgctgcagacgcaggtagtggag
gtgggacaggagagcttccagagcaaagatactgggaaacggccaaacgttgctaatgtt
ccaggtaaagtgttcctgggccctcccagactgtaccaggagctggaggagctacaacac
gacctgtatgtggttgaaaacatcaccctgctggtggggactttacaaggcacctaccag
aacctgaacacaacagtagggcaggactggtgccttgcactgcagaggctcatccacatc
aaagatgaacagatccagtgtgccaacaagtgccgcctgcggctggctgtgccaggcaag
cctgacaaatctggacgaccggtcagtttcatggtggttttcaacactcccagtcccctc
agcaagatctcctgggtcaaccgcctacacctcgccaagatagccaagagggaagagaac
acgccaggctgggtgtttgcagaggatgatgggaagactagacatccattttggtgtccc
ctgctagcctgccgacttcccatcttctcctccaaaacacaagaccaaaagctggagact
gcccttcacaacccggtccaatgtgccctgctggcattctctgcagccagcacctctctg
ccgcagggctacctttgggtggccagtggaggtgaccgcaaccatggtcaagtggaaatc
ttctctctgaaccgctccatgccgcgcatggtcaagtccatccagatgggggcgccagtc
ctgtgtctggatcacgtgatggagccttgtcccacagaggaggaaggggaaggggaggct
gctgtcaagagcacagccaggactggcaacaccatctgtataggcctgcaggatggcaac
attcatgtgtacggtaccgtggacacttcgacccagtgcctgctgaccttctccaaccca
gacagttgtccagttctgtgcctgaaacactctgcctccttcctgttcgctgggctgggg
aatggaaaagtgtctgtttatgctcggaagagtggagaggggctgtgggaccctgactcg
tgcaggctggtgactgtgggcagtggccccatccgcaccctcctaaccctagagaatgct
gtgtgggccagctgtgccaaccacgtcaccgtcatccagggctccagcctccacacacag
agttttgacgcgcaccctgagccactggtcagtgtgagtcacatggtgcgggcgggggga
ggggtgtggatggccttctccgagggctcatccatccgcctgttccacacggagacactg
gagcacctgcaggagatcaacatctccacacgctccaccttcctcagcccagggcagcag
ggcagcgtccgggtcaccagcctactcatttgccaggggctgctgtgggtgggcactgcc
cagggcatcatcgtcaccctgcccgtgcccaaactggaggggatccccaaaataacaggt
aaagggatgacgtctctaaacgctcactgtggccctgtggatttccttgtggtcacctcc
agcaccctgtccccagacatgctcaaacgggattctgtctgcgagactgccgaccaggcc
aatgggggagcgggaggaggagagggtggggagcggaggaatgaattgtcccaggagtca
ctctcacaacctgactgctcctcccctcagggagagccctccaaggccaagggaatgctg
cttcagtatcgcctccgctcaaccacccagctgcccggcaagctgctgacagccgaaccc
gaccagagcccatgtgacgccccaccggagaccccggagcacagccctgaggacggctct
atctatgagctgagcgaggaccctgaggtatgggtacgggggcagcccccggccagggag
gggcgtgggaaggacaaggtgacctcggctgccgtcttctccggaggcagggggttccgt
cgacttggggaggagactatagcagccaatggggacccagatgaaagtacgctcatggtt
tggcaactcccactaacagtgagtccatga
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