Oncorhynchus nerka (sockeye salmon): 115102220
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Entry
115102220 CDS
T07952
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115102220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115102220
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115102220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
115102220
NCBI-ProteinID:
XP_029477765
LinkDB
All DBs
Position
LG20:12811813..12828206
Genome browser
AA seq
1602 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSSKEAETAEASTLATANTATAGPTE
GAEQESCDSMETVAASGENDASIDESSSSASCSTEPQTRLSRSGVSGQVRSEAQAQTRLS
RSRQSSRQRKKAVMMPRVVLTPLKVNGEHVPSGAAGRRREDSRGGPGPTLRARPELTSWK
RPQHFKSLRGYHSGPMKRSRGGVEVDFETPGSILVNTNIRALINMRTFSAFPAHSQQQLL
QLLPEVDRQVGPDGLARLSNSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEK
KVEAWKEKFFEEYHGQKSGLTREESLKLTMSEAADAATSVLDSKVALVAAGTPKRRNVGR
RRRDGRMRRRTRADLRRRAQRTLCKTNSPTLQSSKQLEGTLTLDAASVASVPLPVPEATT
VQGGEVVLQADCELEDPAQCASLEPVPCPSPVPVLPPVTMPVPTPTPSPSPVSISTSDEP
EVTARLLPEEPAPAVASTSSPSSSSSSSSSSSSSPSSSPSSNSERQGGFTAGLDSSSSSS
SSSTAAATADPLDDGASMVTSVTGGTTTSSRESSPAASPAPIIATSAQAAKEQKRRPDEP
QAFCSFPEKRPRMEDRQSFRTTIDGVHTEKQQPTAEEPKVPPIRIQLSRIKPPWVKGPPT
YQICPRIVPPGEGSRRSGTGARTLADIKARAQQARAQREAAAAVAGTGDGPGPGGGRAGA
GLQDCSSGRRTREHPGPVEPGGAGDVEEQGSPAGSHPPGTQLQQSKLEPSTPTPNTAASS
PSLSTSSNPSLSFSEPPQTPTPSPTTQEERQGELSGEEGTTPPPIKGTSNGLSDKSALLE
PESVSSHLRGRGEGDDCDRTMTKNGPLAPTSIPDSLPRFGAQGVDVIRSLAGGGGGVIQH
GSHHVGPQENPPTPAIEGHSQSEKHSQPSERGRDTASLPRLPPSVREDEAGHHSDSTETA
SDCENESQEEEPHLSMWSHRLPAQCNGNIQHLQRLSQQAHGQPVICSPPLQQIQQPVIQT
HVSNHHGHSQTVIQPCFPNGLPSQSLIQPGQKQPQPECTPHPDQQTLAAPHSQTQRGHKT
DPMDDYKASSRGSAEENCRLGLKPSPMHPTAGSKRLPSSARPVSTVEANNPLVTQLLQGS
LPMEKVLPQTHSSSKLEINRLPGGPQPAPQSQLNWQQQTKSPGLRFRGPTEAHTGESLVP
ELSSQNQQKSPVGRGGSPGASRSFGSSPLGTVPSRMACLLEEASSRATAMQQYLSQQPGG
SVPLGAVPVITSLSSSSSSRRNSQESAVIRESPERHHNNIAQPRATPDLCPSEVVPTVKI
NWHPSKPHPPHQQQLSPALNVKSEVSSRPSCQALAKTSPSGPMVGGGPGVVVTKKEAVNS
MDGYLTGGGGAMEGLLNMEMSLARMAKKEAQSKAQYSSTSPSSSSSSISSLPFQLYGKLP
KQGGGSGVSAPGFSYTANVSVVDGSGFSRSIADGVLQLRQRHSASQSATLSIQAFADSAA
EEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagagaaagaaggaacgcacgtgggctgaggcggctcgcatggtt
ctagagaacttctctgatgcccccatgacgcccaagcagatcctgcatgttattcagacc
aaggggctcaaggaaatgagaagtggcacagcccctctggcctgtctggtgaccatgctg
cattcccaggtgaggggggacagagtaaaaaacagcatcttctttaagcttcctggcagg
atgagtctgtttaccttgaagaaaaacgctctgcagtggaccaagagttcgaaggaggcg
gagacagccgaagccagcacactggctactgctaacacagcaacagcagggccaacggaa
ggtgcggagcaagagagctgtgactccatggaaacagttgcagccagtggagagaacgat
gcgtccatagatgagagctcgtccagtgcctcatgctccacagagccccagaccaggctg
agtagatctggagtctctggacaggtgcgctctgaggcccaggcacagacccgactaagt
cgatccagacagtcgagcagacagaggaagaaggctgtgatgatgccgcgagtggtcctc
actccactcaaggtcaatggtgaacacgtcccatcaggagcagcggggaggcgcagggaa
gactctagggggggtccaggccccacgcttcgtgcccgccccgagctgactagctggaaa
cgcccccagcacttcaagagcttgcgtggctaccactcagggcccatgaagaggagccga
ggcggggtggaggtggactttgaaacgcccggctctatcctggtcaacaccaacatcagg
gctctcatcaacatgcgcaccttctctgccttcccagcccactcccaacagcaactcctg
cagctcctccccgaggttgaccgtcaggttggacctgatggtctggctcgcctcagtaac
tcggctctcaacaatgaattcttcactcacgcctcccagagctggaaggaaaggcttgct
gagggggagttcacccatgagatgcaggtgcgattccgccaggagatggagaaagagaag
aaagtggaggcatggaaggagaagttctttgaggagtaccacggtcaaaagtctggcctg
acccgagaagagtctctgaagttgacaatgagcgaagcggccgatgctgccaccagcgtt
ctggacagcaaggtggccttggtggcggcgggaacgcccaagcgccgcaatgtgggcagg
cggaggcgtgatggcaggatgagacggcgaacgcgggcagacttgagacgcagggcgcaa
cgcaccctctgtaagaccaactcccctaccctgcagtcctccaagcagctggaaggcacg
ctcactttagatgcagcttctgttgcctctgtccccttgcccgtcccagaggccaccacg
gtgcagggaggagaggtggtgttacaggccgactgtgaactggaggatccggcccagtgt
gcctccctagagcccgtgccctgcccttcccctgtacctgtgctcccgcctgtgaccatg
cctgtgcccaccccgacccccagtcccagccctgtatctatcagcacctccgatgagcct
gaagtcaccgcccgcctgctccctgaagagcctgcacctgccgtcgcctcaacctcctct
ccctcctcctcgtcttcctcctcctcctcctcgtcctcctccccttcctcatctccctcc
tccaactcagagagacagggggggttcaccgccggcttggattcttcctcctcgtcctct
tcttcctccacggccgctgccaccgctgatccactggacgacggggcctccatggtcacc
tcagtcacggggggcacaaccaccagcagccgggagagcagccctgcagccagccccgcc
cccatcatcgccacctccgcccaggccgccaaggagcagaagaggaggccagacgagccc
caggccttctgcagcttccccgaaaagaggccgcgaatggaagatcgtcagtcctttcgt
accacaatcgacggggttcacacggaaaagcagcagccgacagcagaggagcccaaggtc
ccacctatccggattcaactctcccgaatcaaaccgccctgggtcaaagggccgccaacc
taccagatctgtccccgcatcgtgccccccggcgagggctcgcggcgctcagggacgggg
gcgcgcaccctggcggacatcaaagcccgcgcccagcaggcccgggcccagcgcgaggcc
gctgctgctgttgcaggcactggggacggaccagggccgggcgggggcagggctggtgct
gggctacaggattgcagcagtggaagacgaacgcgagagcacccaggacccgtcgagccc
ggaggagcaggagacgtggaggagcagggatcgcctgcgggctctcatccgcctggaaca
caactacagcagtccaaattagagccctctacccccacccccaacacagctgcctcatcc
ccctccctgtccacctcttccaacccctccctgtccttctccgagcccccgcagaccccc
actccatccccaaccacccaggaggagcgacaaggggagctgagtggggaagaggggaca
acaccaccaccaatcaaaggcacctccaacggactctcggacaagtcagcgctgctggag
cctgagtctgtgtccagccacctcagagggcggggcgagggggacgactgtgacaggaca
atgaccaaaaatggtcccctggcgcccacctccatcccagattctctgcccaggttcggg
gcccagggagtggatgtgatcaggtccctggctgggggaggagggggtgtcatccaacat
ggttcccaccacgtggggccacaagagaacccccccaccccagccattgagggccacagc
cagagcgaaaagcattcgcagccctcggagagggggagagatacagcctccctccctcgt
ctcccaccttcagtcagagaggacgaagcagggcatcacagcgattccacggagacggcc
tccgactgcgagaatgagagccaggaggaagagccccacctgagcatgtggagccaccgc
ctgcctgctcagtgcaacggcaacatccagcacctccaaaggttgtctcagcaggcccac
ggccagcctgtgatctgcagcccccctctacagcagatccagcagccggtcatccagact
cacgtgtccaaccatcatggccacagccaaacggtcatccagccctgcttccccaacggc
ctgcccagccagagtctcatacagccaggccaaaagcagccgcagcctgaatgcactccc
cacccagaccagcagactcttgctgcgccacactctcaaacccagagggggcacaaaacg
gacccaatggatgactacaaagcgtccagccggggctcggctgaggagaactgtaggctg
gggctgaagccttctcccatgcaccccaccgctggctccaagaggctccctagttcggcc
cggcctgtgtccacagtggaggccaacaatcctctagtcacccagctgcttcaaggcagc
ctcccgatggagaaagtcctgccgcagacgcactcgtccagcaagctagagatcaaccgc
ctgccaggggggccccagccagccccccagtcccagctcaactggcagcaacagaccaag
tctccgggccttcgcttcaggggccccacagaggcccatacgggggagtccctggtccct
gagttgtcctctcagaaccagcagaagtcccctgttggccgaggaggctcccctggagca
agccggagcttcgggtcctctcccctgggcacagtgccctcccgcatggcctgcctgctg
gaggaggcctcctctcgggccacagccatgcagcagtacctgtcccagcagccaggtggc
tctgtgcccctcggggccgtgcccgtcatcacatccctctcttcatcctcttcctccagg
cggaactcccaagagtcggccgttatcagagagtctccagagaggcaccacaacaacatt
gctcagccccgggccacccccgacctctgcccctctgaggtggtccccactgtcaagata
aactggcacccttccaaaccccaccccccgcaccaacagcagctctcgcccgcactcaac
gtgaagagcgaggtttcctcccggccctcttgtcaagctcttgccaaaacctccccctct
ggccccatggtaggtggtgggccaggtgtggtggtcaccaaaaaggaggcagtgaactct
atggacggttacctgactggaggaggtggggcaatggagggactgctgaacatggagatg
tctttagcccgcatggctaagaaggaggcgcaaagcaaagctcaatactcttccacctcc
ccctcgtcatcttcctcttcgatctcctccctccctttccagctctacggtaagctgccc
aagcagggcgggggcagtggtgtgtcggcccccggcttcagctacacggccaacgtgtct
gtggtagacggcagcggcttctcgaggagcatcgccgatggtgtcctacagctgcgtcag
cgccacagtgccagccagagcgccacgctcagcatccaggcgtttgcagacagtgccgct
gaggaggtggccctcaagtgctcctgccgcctcaaggccatgatcatgtgccagggctgc
ggggccttctgccacgacgactgcatcggcccctccaaactgtgtgtatcctgcttggtg
gtcagatag
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