Oncorhynchus nerka (sockeye salmon): 115102222
Help
Entry
115102222 CDS
T07952
Name
(RefSeq) myelin transcription factor 1-like isoform X1
KO
K23192
myelin transcription factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102222
03036 Chromosome and associated proteins [BR:
one03036
]
115102222
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
115102222
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
115102222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2HC
MYT1
YabA
DUF1664
Prominin
Motif
Other DBs
NCBI-GeneID:
115102222
NCBI-ProteinID:
XP_029477772
LinkDB
All DBs
Position
LG20:complement(12843014..12861594)
Genome browser
AA seq
1191 aa
AA seq
DB search
MSQDTAETRTRTRSKGIRVPVELVGAELSSCPTPGCDGSGHVIGRYSRHRSILGCPIVKK
RKLVEAEAEENQPAPKKKTLPLKLAMDEGFNIADSDAASEAEHKEGEESEEEEQKEKENS
KMPNPAMSMKADCSQVIPKDTEKETSVESYTIAAPEAGTSQKDTATTTQQQASTEEEAEA
EADRHKEEMQVVAEIQAAEEEEDEDTVDAHRTIEHPKGDNETGRAESEEKQKEEVGEEEE
EGGGEEEKEEERQFVSQEISDHQYSSGDYSRHPAKEEGDEEEEKKGEEKEEEEEEKEEVE
EEEEEVEEEKEEEEDEVVYMEPAIPLAPSTPAQECEDTEVAAGEVKIGSPLTEEEEEEEE
EEEEEEEEETEAGEVEEEDHDSHKAPPTTVVIEVRSEEEEEEEEEDEEDDCLSQGSGVTD
DSETWDMTRGNLGLLEQAIALKAEQVRGPHVDQQSPEHQHYHSPDDRASKAMDQAMRHRG
HHSKEKKEVKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRIPPEILAMHENVLKCPTPGC
IGQGHVNSNRNTHRSLSGCPIAAAEKLSKGGHVTPSHPQPSVSESPTGSPHSDRVLRPMC
FVKQLEIPQYGYRPNMVPVTPRANLAKELEKYSKVSFDYASFDVQVFGKPLLVPKIPATS
QTSPKAFKSKPFPKATSPGHSFSGGYAKSSSSSSSSGFDYTHDAEAAHMAATAILNLSTR
CWESPENLRTKQQDPAGKDIDIEVDENGTLDLSMKKPIKMEGMQSPDPCSSSSSQHPGDV
PSSQGHLQEELEGPLDFTKPNCPKEKEEQDEMDYVAHSYTSSDAEDDDITQESMEDRKYP
GEVTTSSFKVQFSPKDCKKEVLLCPTPGCDGSGHITGNYASHRSLSGCPLADKSLRTLMA
AHSAELKCPTPECDGSGHITGNYASHRSLSGCPRAKKGAVKTTPTKDDKEDPELLSRCPV
PGCDSLGHISGKYATHRSAYGCPLAARRQKEGLLNGSPFSWKAFKTEGPTCPTPGCDGSG
HANGSFLTHRSLSGCPRASANKKRTRFPGDEYITAKFKASDVLDNDEDIKQLNKEIGELS
ESNSEMEDDMMNLHTQISSMEKNLKSMEEENKQIEERNDALYMELSGLSQALIRSLSNIR
LPHMQEPMSDQNFDNYVDTLTHMFSNKDCYQNPENRALLESINQAVKGIEV
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggacacagcagaaacgagaacccggacccgctcaaaaggcatcagagtaccc
gttgaactcgtgggagcagagttaagtagctgccccactcccgggtgcgatggttcaggc
catgtcattgggagatattcacgacacagaagcattcttggatgcccaatagtgaagaag
aggaaacttgtggaggcggaggcagaagagaatcaacccgcacccaagaaaaagaccctg
cccctgaagttggccatggacgagggcttcaacatagcagacagtgacgccgccagtgag
gcagagcataaggagggggaggagtcagaggaggaggagcagaaagagaaggaaaatagc
aaaatgccaaacccagccatgtccatgaaagccgattgctcacaggtgatacccaaagac
accgaaaaagagacatctgtcgagtcctacaccatagctgcacctgaagcagggacttcg
cagaaggacacagccaccacaacccaacagcaagcttccacagaggaagaagcagaggca
gaggcagacagacacaaagaggagatgcaagtagtggcagagatacaggccgctgaggag
gaggaagatgaggatacagttgatgcacacagaacaatagagcatcccaaaggcgacaat
gaaacagggagagcagagagtgaggagaagcaaaaggaggaggtaggagaggaggaggag
gagggaggaggggaggaagagaaagaggaggagaggcaatttgtgagtcaggagatctca
gatcaccagtattccagtggcgactatagcaggcatccggcaaaagaggagggagatgag
gaagaagagaagaagggagaggaaaaggaggaggaggaggaagagaaggaggaggtggaa
gaggaggaagaggaggtagaggaagaaaaggaggaagaggaggatgaggtggtctacatg
gagcctgccatccctcttgcccctagtactcctgctcaggaatgtgaggatacagaagtg
gcagcgggggaggtaaagattggttccccgttgactgaagaggaggaagaggaggaggaa
gaagaggaggaggaagaagaggaggaaacagaagcaggggaggtggaagaagaggaccac
gactctcacaaagccccacctaccacagtggtcattgaggtacgatctgaggaagaggaa
gaggaggaggaagaggatgaggaagatgactgtctctcacagggttcgggggtgacagat
gactcagagacctgggatatgacccgggggaacttgggactgctggagcaagcaatcgcc
ctgaaggccgagcaggtgagagggccgcacgtcgaccaacagtctccagagcaccagcac
taccacagccccgacgacagggccagcaaagccatggaccaagccatgcgacacagagga
caccacagcaaagaaaagaaggaggtgaaatgccctacccctgggtgtgatgggacgggc
catgtgactgggctgtacccccaccaccgcagcctctctgggtgccctcacaaagatagg
atcccacctgagatactggccatgcatgagaacgtgctgaagtgtccaactccaggatgc
ataggccagggtcacgtaaacagcaatcgcaacacacaccgcagtctttccggttgtccc
atagcagctgcagagaaactctccaaggggggccatgtcacccccagtcacccccagcct
tcagtcagcgagtccccaactgggagcccccattcagacagagttctcagacctatgtgt
tttgtgaagcagctggagatccctcagtacggctacagacccaacatggtgcctgtcaca
ccccgtgccaacctggccaaagagctggagaaatattccaaggtctccttcgactatgca
agcttcgacgtccaggtgtttgggaagcctttgctggttccaaagatacccgccaccagt
caaacctcacccaaagccttcaaatctaaaccattccctaaggccacgtccccgggccat
agcttctcgggaggatatgcaaagagcagctcctcctcgtcctccagtggtttcgattac
acccatgatgccgaggctgctcacatggctgccactgccattctgaacctgtccacacgc
tgctgggagagtccagagaaccttcgcaccaaacagcaggacccagctggcaaggacata
gatattgaagtggatgagaatgggacgctggacctgagcatgaagaagcccatcaagatg
gaagggatgcaatcaccagacccctgctcttcctcctcctcgcagcacccgggagacgtt
ccctcgtcccagggccacctacaggaggagttggaggggcctctggacttcactaagcca
aactgtcccaaagagaaggaggagcaggatgagatggactatgtggcccactcctacacc
tcctctgacgcagaagatgatgacatcacccaggagagcatggaggacaggaagtaccca
ggcgaggtcaccacgtccagcttcaaggtccagttctcacccaaagactgcaaaaaagag
gttctactatgtcccaccccaggttgtgatggcagtgggcacatcactggaaactacgct
tcacatcggagtctgtcaggctgtcctcttgctgataagtctcttcggaccctcatggct
gcccactctgctgaactgaagtgtccgacccctgaatgcgatggatcaggtcacatcact
ggaaactacgcctcccatagaagtttgtctggatgtccccgtgctaagaaaggtgccgtc
aagacaacacccaccaaggatgacaaggaagaccctgagcttttaagtagatgcccggtg
cccggctgtgacagcctgggccacatcagtgggaagtatgccacccaccgtagtgcctat
gggtgcccgctggcagcgcggcgtcagaaggaggggctcctcaacggttctcctttctcc
tggaaggccttcaagacggagggccccacctgtcccacccccggctgtgatggatcagga
cacgccaacggcagcttcctcacacaccgcagtctctctggttgtcccagagcctccgct
aataagaagagaaccaggttccctggagacgagtacattacagcaaagttcaaggccagc
gatgttctggataatgatgaagatatcaagcagctgaacaaagagatcggggaactgagt
gagtccaactcagagatggaggatgatatgatgaacctgcacacacagatctcatccatg
gagaagaacctgaagagtatggaggaggaaaacaagcagattgaggagaggaacgatgcc
ctgtacatggagctgtctggcctgagccaagctctgatccgcagcctgtccaacatccgg
ctgccacacatgcaggaacctatgtcggaccagaacttcgataattacgtggacaccttg
acccatatgttctccaataaagattgctaccaaaacccggagaaccgcgctctgttggag
tccatcaaccaagcagtaaaaggcatcgaagtgtag
DBGET
integrated database retrieval system
