Oncorhynchus nerka (sockeye salmon): 115102242
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Entry
115102242 CDS
T07952
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08538
farnesoid X receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102242
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115102242
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115102242
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115102242
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115102242
NCBI-ProteinID:
XP_029477807
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Position
LG20:complement(13301395..13312969)
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AA seq
492 aa
AA seq
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MREWSESEMTMSAGGYLSASDGYGITEPLQYYDVLGDPLGYPFQEPDLQGLAFSQQQYSP
INVQFSVYGPPNSQHFHPPSTHPYSPHCLDTPCEPSPEPQCGSLGKGRGGGDLSLVKRTR
LGPGGRVRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDM
YMRRKCQDCRLQKCRAVGMLAECLLTEVQCQSKRLRKGTKHRGGGPEEEENMGSRRVSST
SRLSGQVVSENLSVEQKHVLDRMVEAHRQYSAQDTTHCRVFEWTCTEVGGDRLTDMACPP
SQRLLQFAKSVPGFELLDCLDQTTLLSSSSVEVMFLLSAQQFTQNPAASSPALQPFNIST
HHWLKTLESKENIHSGTGPVNSGVNEDLLGPVLNFFHSMASLGVTEAEYALLTATALLCS
ADEASLRAVVCVESLQELTMELLSRVCGARYGAQGPQGAQRFARLLGRLTELRTLRHNHL
TLLRQQLWDSQP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagtgagtcggagatgaccatgtctgccggtggttacctctctgcctct
gatggatatggcatcaccgagcctctgcagtactacgatgtgctgggggaccctttgggc
taccctttccaggagccagacctacagggcctagccttcagccagcagcagtacagcccc
atcaatgtgcagttctctgtctacggaccgccgaactcccagcacttccacccaccttcc
acccacccctacagcccccactgcctggacactccctgcgagcccagcccggagccccag
tgtggaagcctggggaaggggcgaggtgggggagatttgtccctggtcaagaggaccagg
ctgggtccaggaggaagggtgaggggccaggatgagctgtgtgtggtgtgtggggacaaa
gcctctggctaccactacaacgccctcacctgtgaaggctgcaaaggtttcttccgaagg
agtgtgacgaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggacatg
tacatgcggagaaagtgccaggactgccgcctgcagaaatgtcgtgctgtgggcatgctg
gctgaatgtctgctgacggaggtgcagtgccagtccaagaggctgaggaaggggaccaaa
cacagaggaggagggcctgaggaggaggagaacatggggagcaggagagtcagctccacc
agcaggctatcaggacaggtagtgtctgaaaatttgtcagtagaacagaagcatgtgctg
gacaggatggtggaggctcatcggcagtacagtgcgcaggacactacacactgtagggtg
tttgagtggacttgtacggaggttggtggagacagactaacagacatggcatgccctccc
tctcagaggctactgcagttcgccaagagtgtacctggctttgagctcctggactgcttg
gaccagaccaccctcctctctagttcatctgtggaagtcatgtttctgctatcagctcag
cagttcacccagaacccagcagcctctagcccagcactacaacctttcaacatctcaact
catcattggctgaaaaccttagagtccaaggaaaacattcatagtgggaccggccctgta
aactcaggagtcaatgaggacttgctaggaccggtgctcaacttcttccacagcatggct
tcattgggggtgacggaggctgaatatgccctgctcactgctacagcactactatgctca
gcagacgaagcgtcgctgcgggcggtggtgtgtgtggagagcttacaggagctgaccatg
gagctgctgtccagggtgtgcggagcccggtatggagcccagggccctcagggagcccag
cgcttcgctcgcctgctggggagactcacagagctgcgcacgctacgacacaaccacctc
accctgctccgacagcagctctgggacagtcagccttga
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