Oncorhynchus nerka (sockeye salmon): 115102244
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Entry
115102244 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115102244
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115102244
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115102244
Protein kinases [BR:
one01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115102244
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115102244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-B_box_Trim66
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
115102244
NCBI-ProteinID:
XP_029477816
LinkDB
All DBs
Position
LG20:complement(13335572..13354836)
Genome browser
AA seq
1310 aa
AA seq
DB search
MADNKGEEDMESSSKLDSEPQGEDSGDPELKDVNPLIAIETNLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEGSISSNVSPVGNTNGGTTELKNENAVIVIESISKEGED
SQSQENISQVPTPANVSGGGDASSNSAGAEGEGSTSNSPVGNTNGGTTESSAAGDTAGTS
PALTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPLPE
RQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQMC
TSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVFC
PIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKTY
VHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKLL
TQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGA
VRFFCDPTFWAKNVVNLGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQL
RQQHMQQQAFAQQKQQQQHQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQHQ
QQQHQQQQQHQQRIQEQMRIASQMSQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGGPN
MYPPHHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQHSNPGHAGPFPVASLHNV
SAANPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNPENLPCLPNIPPIQLEDAGSSS
LDALLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSSGLSNSHTPVRPSSTSSTGSRG
SCGSAGRPGPASGPMEQQVKVKQEPGAEKECGFSGTTTSNVKTEQGKDGGRSACMMSSSE
SRCTPPLPLLGSVTSGSSVQDILKKVGEHVKTEPQDQEACSGANRPGNAPISSTSTVASA
ALLTNGKGAASAALRSPRTAQGTNQSGAGGKEDDPNEDWCAVCNNGGELLCCDRCPKVFH
ITCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEPRDEKDNSEQGLSPEDQRRCERLL
LYVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLKHVQHYQSPKEFVSDVRL
VFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYFEERLLELYPDESFPEVP
EEPEVPEVPEEPQVPAGEGEEADLTEDSEDEFVQPKRKRLKTDEKPMHIK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
cagggagaggatagcggagacccagaattgaaagatgtgaatccgctgattgccatagag
acaaatttgaaagaaggagaggattcacaatcccaggagaatgtttcccagatgcctaaa
cccgctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagaaggcagcattagcagtaatgttagcccagttgggaacaccaatggtgggacaacc
gaattgaaaaatgagaatgcggtgattgtcatagagtcgatctcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcggaggaggg
gacgctagcagcaacagcgcgggcgcagagggagaaggcagcactagcaacagcccagtt
gggaacaccaatggggggacaaccgagtcctcggctgctggggatactgctggaacctca
ccagcactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtcatc
ccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccagacccgtgactgt
gaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgccagag
cgacaagttaccgtacaggtgcctgggccgaacggacagccagacacccacatagtgaat
gtcatgcggtgtgtagtttgttgtcaagactgcaaacaaagtgacatcattgacaactac
tttgtcaaggacaccaccgaggcctccaagacttcagatgaaaaatctgcacagatgtgc
accagttgtgaggacaatgccgataccattgggttctgtgcagaatgtggagagtggttg
tgcaaaacctgcatcgaggctcaccagagggtcaaaatcaccaaggaccacaaaatccgc
aagaaagaggatgtctctgaggagtctgtaggtgtgtcggaacagaggcctgtgttctgt
cccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacctgc
cgggactgccaactgctggagcataaggagcacaggtaccagtttctggaggaggccttc
cagaaccagaaaggcatcattgagacgcacatggtcaaactgcaggagaaaaagacctac
gttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccataag
aaggtggaacatgacatcaagatagccgtattcactcttatcaacgaaatcaacaagaag
ggcaagtatttactgcagcagcttgagagtgtgactaaggagaggagcatgaagctgttg
acccagcagaccgacatcgccaacctggccaggcagatcctccatgtgctcaacttcacc
cactctgccattaacagcggcagcagcaccgccctgctttacagcaagaggctgatcatc
taccagctgcgcaaggtcctgaaggctggactggaaccagtgcctcaggctaacggagct
gttcgctttttctgtgaccccacattctgggccaagaacgtggtcaacctagggaacctg
gtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatctcc
ccgggccacggccacccaggccacggcaaaagccctgggcagatcaatctggcccagctc
cggcagcagcacatgcaacagcaagccttcgcccagcagaaacagcagcagcagcaccaa
caacagcagcagcaccaacaacaacaacaacaacagcagcagcagcagcaacaacagcag
cagcagcagcagcaacaacaacagcagcaccaacaacaacaacagcagcagcagcaccaa
cagcagcagcaccaacaacagcagcaacaccaacagaggatccaggaacagatgcgtatt
gcctcccaaatgtcccagcagcaccccaggcaggctgtacctcagatggtacagcagcag
cccccgcgcctcatcagtatgcaggcccagcagaggggccccatgaacggcgggcccaac
atgtaccccccccaccacctgcgcttgcccccgggacagggccgcatgcccagctccagc
gcccagccacgcatgcccaacggccagcagtactcccccatgatgcagccccagctgcag
agacagcattcaaacccaggtcatgctggacccttcccagtggcatctctccacaacgtg
agcgctgccaaccccaccagtcccaccagtgccagcatggccagcgcccatgcccaccgt
ggccccgccagccccatagtgggcgccatcgacctcatcccctccgtcaccaacccagag
aacctgccatgcctaccaaacatcccccccattcagctggaagacgcgggctccagcagc
ctggatgccctactgagtcgctacatcttagccagcacataccctcagctgggcctgggg
ccccccgggaacatgaacctctcccacggaccctccacacactcccctggctcctcaggc
ttatcaaactcccacacgcctgtgcggccatccagtacgtccagcacaggaagcaggggc
agctgtggatctgcgggtaggccagggccagcaagcggcccaatggaacagcaggtcaaa
gtcaagcaggagcccggagctgagaaggagtgtggtttctcgggaaccaccacctccaac
gtcaaaacggaacaagggaaggatggagggaggagcgcgtgcatgatgagtagttcagag
agcagatgtactccccctctccccttgttgggctctgtgacttctggctcctctgtccag
gacatcctcaagaaggtgggggagcatgtcaaaactgagccccaggaccaggaggcctgc
agtggggccaacaggcctggcaacgcccctatcagcagcacatccactgtggcctctgcc
gcactgctgaccaatggtaagggagccgcatccgctgccctgcgctctccacgcactgca
caggggaccaaccagagcggggcaggagggaaggaggacgaccccaacgaggactggtgt
gctgtgtgcaacaacgggggagagctgctttgctgcgaccgctgccccaaagtcttccac
atcacctgtcacatccccaccttgaagtgctccccgagtggtgagtggatgtgcacgttc
tgccggagcctggcaagcccggagatggagtaccagcctgacgacgagcctcgtgacgag
aaggacaacagtgagcagggcctgagtcctgaggaccagaggaggtgtgagcgcctcttg
ctgtatgttttctgccatgatctcagtgaggggttccaggagcctgttcctccctctatc
cctaattactacaagatcatcaagaagcccatggacttgaccctggtgaaacagaagcta
cagttgaagcatgtccaacactaccagagcccgaaggagtttgtctcggatgtgcgcctg
gtcttcagcaactgtgccaagtacaatgagatgtctcgaataatccaggtatatgatgag
gagaaacagagtaatgtgcaggcggactccgaggtggcggaggcagggaaagctgtgagt
ttgtactttgaggagaggctgctggagctctatccagatgagagtttccctgaggtacca
gaggagcccgaggtaccagaggttcccgaggagccgcaggtcccagctggagagggagag
gaggcggatctcacagaagactccgaggatgagtttgtgcagcctaaacgcaagcggtta
aaaacggatgaaaagccgatgcacatcaagtga
DBGET
integrated database retrieval system
