Oncorhynchus nerka (sockeye salmon): 115102264
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Entry
115102264 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 19-like isoform X1
KO
K20691
Rho guanine nucleotide exchange factor 19
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102264
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115102264
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
SOS1_NGEF_PH
PH
Shugoshin_C
DUF4439
HxlR
Motif
Other DBs
NCBI-GeneID:
115102264
NCBI-ProteinID:
XP_029477874
LinkDB
All DBs
Position
LG20:13900102..13937027
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AA seq
987 aa
AA seq
DB search
MARGYYVSILKFIAKTCFSFLHFPCVLSVMLPGYGFSPLPDFQPHLHVFRCRGECPSMWF
PVSGESQALSEARDDRPLLRQCQHNHIAVCQQERQPPVTPSDNGHGSPTADVQHSTPLPL
NHRKHIRTEALNGGWRSNPDQDTDTDLSSDSQMLGGDVELFIREDRRTDPPGQEKCERPM
VVSTVFRPLHTALSLPLFLPLSSLYRDTDYCNSQPPGSPYSHEPPEMQTPDTCRPQRRTS
QGSLKEKSIRRKMRVYSPDSLSDDSLASPILDGDYLFSGPFDSFLEEDIGGDPVDATSPS
STGGTPNPRKTPPFSAEPLQLSEHSSVLNYGAVENSSATGGSSLARSSMAEHERRRFSAS
ELISRLQLSQRKNSFTLKLGKSLSARVASRDRQNPSNFSPDYKSTSRHRGSGGASDSAPH
SPVGPTPQLPSADKNTQQHRRSTGFTIKNLRKKSIEDDWCTPPTVSRSNRLSRFLPSSIL
YQEYSDVAINREILRQQGEEPGAEEEGLSEEGAGETPSPSNLSPSSSFCSSRGSAFSLWQ
DIPDVRNSGQLDNFSNVERKLQEAKFELVTSEASYIRSLTIAVDHFMLSQELGECLGAQD
RQWLFSKLPEVKDVSERFLQDLEHRLEEDILRFDVSDIVLAHCPALRRVYLPYVTNQAYQ
EQTYQRMLQENARFPGILARLEEDPICQRLPLASFLILPFQRITRLKMLVENILKRTTPG
SRDEDTATKAFNELKKIIKECNSSVQSMKRMEELIHLNKKIHFEGKIFPLISQSRWLVKH
GELLEVDTQTMSISGSKFKLPTRPVYLHLFNDCLLLSKRKDTWKFMVFVHAKIGQLKVKD
LSQKLQGISGFIFHLQLCEGRQLKHQILLKAHTESGKQRWITAMFPSDPLEDIEQATEND
DLSQVQCIKSYQAQEHDELTLEKADILQAKTITSDGWVEGIRLSDGERGWFPKTNVEEIT
SRSARLRNLRENIRVKCVTQKLEEELF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaggatactatgttagcatattgaagtttattgcaaaaacttgtttctccttt
ctgcatttcccatgtgttctctcagtcatgcttcccgggtatggattctcccctctccct
gacttccagcctcacctccatgtcttccgttgccgaggagagtgtcccagcatgtggttc
ccggtctcaggcgagtcccaggctttgagcgaggcccgggacgacaggcctctcctgcgg
cagtgccagcacaaccacatcgccgtgtgtcagcaggagcggcagccgcctgtgaccccc
agcgacaacggccatggatcacctactgcagacgttcagcactccacccctttgcctctg
aatcatcgcaaacacataaggactgaagcattaaatggcggctggaggagtaaccctgat
caagacactgatacggacctgagttcagactctcagatgctagggggtgacgttgagctt
tttatccgggaagataggaggactgaccctccagggcaagagaagtgtgagagacccatg
gtggtgtcgacggtgtttcgtcccctccacacagccctcagcctgcccctgttcctccct
ctgtcctccctgtacagggacacagactactgtaactctcagccacctggctctccatac
tcacatgagcctccggagatgcagaccccagacacctgtcgaccccagaggaggacgtca
cagggttcactcaaggaaaagtctatccggcgtaagatgcgagtgtactcaccagacagc
ctgagtgacgattctttggccagccccattctggatggcgactacctcttctcaggaccc
ttcgattccttcctggaggaggacatcgggggagaccctgtagatgccacgagcccctca
tcaacaggggggacacccaacccccgaaagactccacctttttccgcagagccgctgcag
ttgtcagagcactcatctgtcttgaactatggggctgtagagaattcctcggccaccggt
ggaagctctttagcccgctccagtatggcggaacacgagcggcgtcgcttctcagcctca
gagctgatctcacggctacagctttcccagaggaagaactcgttcacactaaagcttggc
aagtcgctgtcagctcgcgtggcctcccgcgacaggcagaaccccagcaacttcagccct
gactataagtccacttccaggcatcgtggctcaggtggtgccagtgacagcgccccccat
agtccagtaggacctacaccgcaactgccatctgctgacaaaaacacgcaacaacatcga
cgtagcaccggattcacaatcaaaaatttgaggaagaaatccattgaggatgattggtgc
actcctcccacagtcagcagatccaatcgtctgtcacggttcctccccagctcaattctg
taccaggagtacagtgatgttgcaatcaaccgagaaatcctgaggcagcagggggaggag
ccaggtgctgaggaggaggggctaagtgaggaaggggctggggagactccatctccatct
aatctgtctccatccagctccttttgctcgtcacgaggctccgccttctcgctgtggcaa
gacatccctgatgtccggaacagcggtcagctggacaacttcagcaacgtggagcgcaaa
ctacaggaggccaagtttgagctggtgacatcagaggcgtcgtacattcggagtctgacc
atcgcagtggaccattttatgctgtcccaggagctgggggagtgtctgggggcccaggac
agacagtggctcttctccaagctccccgaggtcaaggacgtcagtgagaggttcctgcag
gacctggagcaccggctggaggaggacatcttgcgttttgacgtgtctgacatcgtcctg
gcccactgtcccgccctgcgaagggtctacctcccctacgtgaccaaccaggcctaccag
gaacagacctaccagcgcatgttacaggagaatgctcgcttcccaggtatcctggctcgt
ttggaagaagaccccatctgccagcgtcttcccctcgcctccttcctcatcctccccttc
cagaggatcacacggctcaagatgctggtggagaatatcctaaagaggacaacaccaggc
tctagggatgaggacacagccaccaaggccttcaatgagctgaaaaagattataaaggaa
tgtaactccagtgtgcagtcaatgaagaggatggaagagctcattcacctcaataagaag
atccactttgagggcaagatattccctctgatctcccagtctcgctggctggtcaagcat
ggagaactgctcgaagtggacacacagaccatgagtatttctgggtcaaagttcaagttg
cccacaaggcctgtgtacctgcatctgttcaatgactgtcttctgctgtccaagaggaag
gacacgtggaagttcatggtgtttgttcacgctaagatcgggcagctgaaggtgaaggac
ctcagtcagaagcttcagggcatctcaggtttcatcttccacctgcagctgtgtgagggc
cggcaactcaaacaccagatcctactcaaggcccacactgagagtgggaaacaaagatgg
atcacagccatgttcccctctgatccattggaagatattgagcaggccactgagaatgat
gatctttcccaagttcaatgcatcaagagttaccaggcccaagagcatgatgagcttaca
ttggagaaagctgatattcttcaagccaagaccattacaagtgacggctgggtggaaggc
attcggctgtcagacggggagcggggctggttccccaaaaccaacgtggaggagatcaca
agtcgcagtgcgcgtctccgcaacctcagagaaaacatccgtgttaagtgtgtcacacag
aaactggaagaggagctcttttaa
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