Oncorhynchus nerka (sockeye salmon): 115102277
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Entry
115102277 CDS
T07952
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115102277 (nphp4)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
115102277 (nphp4)
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Other DBs
NCBI-GeneID:
115102277
NCBI-ProteinID:
XP_029477924
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Position
LG20:complement(14803589..15018666)
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AA seq
1461 aa
AA seq
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MTDDWKGLFERGRVIPPHSQTVRLAQDSSHTHSQGFQIILKHLDGPHIQQEKKEGESEGN
RKREPVKYQLSVSLFDTSHQHFFGRTLKSSPQQMSGVHRALFNEVVYLHTSLRLPSVVAV
VELVALQPRADGSQHEHALGCGFAILHLFSSMTEPQATEGDRRLSMYHGTPRTLLHPLVR
DPIEQNKLLRPIDGAHLVCSLKPHPALAPAMHLFPQNMLVSGDENIPGVTPSPTGDSLLK
PHMVKSLTCFLDRLSISLHPSLEKFESQLLQHVSTDCHNTKHSGPESSPVVVIQERRLHV
GVHNGWGFLERPQVVVLETTEATDWSRGHTKGGTSRQGTLTRDCSSSPSQSLALRSSLEL
KLPSHQAVGIALQLEYVFSSSLIGDGKLSSTSTISRTAFMQCLRWGVWCPFQEWGALRAK
EVKLSLQGGSTPNPYGIMAYTSSSNSQSPAQVVDERDMVRFRLSSSSVQKASSSTAVSPR
RSREGQQRKPPSPGQSRRASQASPPGSPQGPGLSMSQLAATSRYPTMSHSTAVSPWQQPF
SSQLYPSPLASAHQLSHVELPAASNITHLEVDLNVSPRDHLPAYQSAALANEGHLELQEL
PFTPIHAPIITMGTHAAPSSSFVSSRSSLAHLYSAGFPNITDPSGLVAEVQDPTEPVNFD
PQREEADPLQGNVLLLQFLAFSRIPQQGGSSNWPDSVHFTFQLYRFPPVTTQRLKLLGID
KLPKKSSETPPCVLAVINNDGTVNSGSPGLQLQFRVDGAFLQPGERRWFLRYLALHTLQV
DVWDSQSLLLIGSTALGLKHMLRQGRPAVQATHELEVITTEYMGEGVPVSLHRAPNPISV
FTTIKGRLHLRLGNVGCPVDQNKPNKPQCLPPSRSHIISPPDATSGFTGGSLSSKSIQRL
SVRNAARAQRLVELDGDLVPLLQSHMKEGGGTPCTNTPWWGETDDVRQRKLNRMVAVRQH
EGGQDGTGSEVKTKVTGRRAERAQLARDLRLMHAYRERSKAEGITHILSQAITIHHTIYA
TLGTAEYLEYVLRNPFNTPQTVTIYSEDPELSVITDCDEWRYFKTLTKTLTPLEEGMFHL
KEGTLAPQVYLRPKESVHVPLKYQTFVSDNSVVPQGPSLIPSGRSTQVAKKHLSNTVLAK
SIKVTFRAEDGKPLAICQVSVEPTPHVIDQTFRFYQPELSFLKKALRLSSWERTPVGDTD
AGSQISVRCSDPNVICETKMLAQGEPQDVYLKVPGSPSPQIRKFFVTVFTDKWLAVPAQV
WQVYVHFLQRVDISCVTGQRTCQSLLIRGTQATRKVRCYTSHPQELKVDPAEVFVLLPGV
VQDLQLCVCPLQAGSRFCYLTVVDVEQHTLVSCWLLSLTCRLPILSKAFEMCAPVGGGRG
STRKITYTNPYPTSRVLLLRSDHPDLLQFKEDSFEIGGGETYRIGLRFAPSQSPGAQEIL
IYINNQEETTEETFCVKVKYT
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgactggaaaggactgtttgagagaggacgggtgattcctccacacagccag
actgttcgactggcacaggactcatcccacacccattctcaaggcttccaaatcatcctg
aagcatcttgatggacctcacattcaacaggagaagaaggaaggggagtcagaagggaat
cgaaagagggaaccagtcaagtaccagctgagtgtttccctgtttgataccagccaccag
cacttcttcgggagaacgttgaagagctcaccccaacagatgagtggtgtccacagggca
ttgtttaatgaggtggtgtacctccacacctctctgcgtctgccaagcgtggtggccgtg
gtggagctggtggcgttacagcccagggcagacggctcccagcatgagcatgcactgggg
tgtggctttgccatcctgcacctcttctccagcatgacagaacctcaggccaccgagggg
gacagaaggctaagtatgtaccacggaacaccaaggaccctactccatccactagtgagg
gaccctatagagcagaacaagctgttgaggcccatcgatggtgctcatttggtgtgcagc
ttgaagcctcaccctgctctagcccctgccatgcacctcttcccccagaacatgctggtg
tctggagatgagaacatccctggggttacgccctcccctacaggagattccctgttgaag
ccccacatggtgaagagcctcacctgcttcctggacaggctgtccatctctctgcatccc
tccctggagaagtttgagagccagctgctgcagcatgtcagcacggactgccacaacacg
aaacactcgggtccggagagctcaccggtggtggtcatccaggagcggaggctccacgtg
ggggtccacaacggctggggcttcttggagcgcccccaggtggtggtgctggagacaacc
gaggccaccgattggagcaggggacataccaaagggggcacgtcccgacagggcacactg
accagagactgcagctccagtcctagtcagagcctggctctacgtagcagtctggagctc
aagctgcccagtcaccaggctgtggggatcgccctccagcttgagtatgtcttctcctcg
tcgctcattggtgacggaaagctctcctcgacctccacaatctcccggacagccttcatg
cagtgcctgcgctggggggtgtggtgccccttccaggagtggggtgccctgagggccaaa
gaagtgaagcttagtctgcagggcggctctacgcccaacccctatggaatcatggcctat
acctcttcctctaacagccaaagtcctgcccaggtggtcgatgagagggacatggtcagg
ttccgtctgtcttccagctcagtgcagaaggcctcgtccagcacagccgtgtctccgagg
aggagcagggaaggacagcagaggaaacctccctcaccaggtcaaagtcggcgtgcctct
caagcatctcctccgggatcgccacaaggcccagggctctctatgtctcagctggcagct
acttcacgctacccgaccatgagccactccactgccgtgtcgccatggcaacagccgttt
tcctctcagctctatccttccccattggcatcggcccaccagctgtcacatgtcgagctc
ccagctgccagcaacatcacccaccttgaggtggacctaaacgtgtcccctagggaccac
ctccctgcataccaatctgccgcgctggccaacgagggccacctggagctccaagagctg
ccgttcacccccatccatgcccccatcatcaccatgggaacacatgctgcgcccagctct
tcctttgtgagttccaggagctccctggcccacctctactcagccggcttccccaacatc
acagaccccagtgggctggtggctgaagtgcaggacccgacagaaccagtcaactttgat
ccccagagagaggaggcggatcccctgcagggcaatgtgctcctgctgcagtttctggca
ttttccaggataccacagcaaggggggagcagcaactggccagactctgttcatttcacc
ttccagctctaccgcttcccaccagtgaccacacagcgcctgaaactactgggcatcgac
aagctgccgaagaaatccagcgagacgccaccctgtgtcctggccgtcattaacaatgat
ggaacagtcaactctggctccccggggctccagctgcagttccgtgtggacggggcattc
ttgcagccgggtgagagacgctggttcctgcgctacctggccctgcacactctgcaggtg
gatgtgtgggacagccaatccctcctgcttatcggctccacagccctggggctcaagcat
atgttgcggcagggccgtccagctgtacaggccactcatgagctggaggtcatcaccaca
gagtacatgggtgaaggtgtgccggtgagcctgcaccgggcccccaacccgatcagtgtc
ttcaccaccatcaaaggtcggctccatctgcgcctgggcaacgtgggatgtcctgtagac
cagaacaaacccaacaagccccagtgtcttcctccgtcacgctcccacatcatctcaccg
ccggatgccacaagtggcttcaccgggggcagcttgtcctccaagagcatccaacgactc
agcgtgcgtaacgcagcgcgggcccagaggctggtggagctggacggggacctggtgccg
ttgctccagagccatatgaaggagggcggtgggacgccctgcactaacaccccctggtgg
ggcgagaccgacgacgtacgccagcgcaaactcaatcgcatggtggccgtgcggcagcac
gaggggggacaagatggcaccggcagcgaggtcaagacgaaggtcacgggccgccgagca
gagcgtgcccagttggcgcgggacctgcgcctgatgcatgcctacagggaacgcagtaag
gcagaagggatcacccacatcctgagccaggccatcaccatacaccacaccatctacgcc
acgctgggcaccgccgagtacctggagtacgtcctccgcaaccccttcaacaccccacag
actgtcaccatctatagcgaagaccccgagctcagtgtcataacggactgtgacgagtgg
aggtatttcaagacactgaccaaaaccttaacccccctggaggagggcatgttccacctc
aaagagggcacgcttgccccccaggtgtacctgcggcccaaggagagtgtgcacgtcccc
ctcaaataccagaccttcgtctcagacaactctgtggttccccaggggccgagtctcata
cccagtggcagaagtactcaggtggccaagaaacatctgtccaatactgtgctggccaag
tcaatcaaggtgacattcagggcagaggatggtaagccgctggccatctgccaggtgagc
gtggagcccacgcctcacgtcattgaccagacattccgcttctaccagccagagttgtcc
tttctgaagaaggccctgcgcctttcctcctgggagagaacgccagttggagacacagat
gctgggtctcagatctcagtgcgctgcagtgaccccaacgtcatctgtgaaacaaagatg
ttggcacaaggggagcctcaagatgtgtatttaaaagtgccgggcagtccgagcccgcaa
atccgaaagttcttcgtcacagtgttcactgataagtggctggcggtgcccgcccaagtc
tggcaagtatatgtgcacttcctgcaacgagtggatatcagctgtgtgactggccagcgg
acctgtcaatcactgctgatacggggcacccaagccacccggaaggtccggtgttacacc
tcgcacccacaggagctcaaggtggacccagcggaggtgtttgtcctcctcccgggtgtg
gtacaggacctgcagctgtgtgtgtgtccgttgcaggcgggcagccgcttctgctacctc
accgtggtggacgtggagcaacacacgctggtgtcctgctggctcctcagcctcacctgt
cgcctgcccatcctctccaaggcttttgaaatgtgtgcacctgtgggagggggtcggggg
agcacacggaagatcacttacaccaacccctaccccaccagccgtgtcctcctgctacgg
tcagaccaccctgacctgctccagtttaaagaggacagttttgagattgggggaggggag
acctaccgcatcgggctgcggttcgctcccagccaaagtcctggtgctcaggagatcctc
atctacatcaacaaccaggaggagaccacggaggagaccttctgtgtgaaagtgaaatac
acctga
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