Oncorhynchus nerka (sockeye salmon): 115102337
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Entry
115102337 CDS
T07952
Name
(RefSeq) acidic mammalian chitinase-like isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00520
Amino sugar and nucleotide sugar metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
115102337
Enzymes [BR:
one01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
115102337
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GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
115102337
NCBI-ProteinID:
XP_029478049
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Position
LG20:18072454..18077998
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AA seq
489 aa
AA seq
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MNKCFISVSGLSVLMCLQMVSSTKLVCYFTNWSQYRPGTGKYLPANVDPNLCTHLIYAFS
MINHNNELVTYEWNDDVLYQSFNGLKKQNPALKTLLAVGGWNFGSSQFTIMVSTPANRQK
FIQSSISFLRMYGFDGLDLDWEYPGARGSPPEDKKRFTLLCRELLKAFEKEAADTSRPRL
LVTAAVAAGKGNIDNGYEIAEVAKYLDFINVMSYDMGGAWDPFTRHNSPLYRGASDAEEG
EHKYFNVDFAMKYWRDQGTPVEKLMMGFATYGRTFRTVSGDNGVGARTSGPASAGPYTRE
AGFWSYYEICTFLNGATVELIEDQMVPFATKGNEWVGYDNRESYEIKARYLKDNKFGGAM
IWALDLDDFAGQFCGQGNYPLISHLRYLLASDLPPLPSTTRPPPLPSTTRPPPLPGTTTS
SVPATTSTPLPGSGFCGGKADGLYSNKEDLNAFYQCASGHTYLQKCAANLIFNEKCKCCD
WNLHNTSLA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatgtttcatttctgtttcaggactgtccgttttgatgtgtcttcaaatggtg
tcatcaaccaaactggtgtgctacttcaccaactggtcccagtacagaccaggcactggg
aaatatctgccggccaatgtggaccccaacctctgcactcatctgatctatgccttctca
atgatcaatcacaacaacgagctagtcacctacgagtggaacgatgatgttctctaccag
tccttcaatgggctgaagaagcaaaatcctgcactgaagaccctgttggcagttggtgga
tggaacttcgggtccagccagttcaccatcatggtgtcaacacctgccaatcgccagaag
ttcatccagtcatccatcagtttcctgagaatgtacggctttgatggcctggacctggac
tgggagtaccctggagcacgagggagccccccagaggacaagaaaaggtttacactgctg
tgcagggagttgctcaaagcatttgagaaggaagccgctgacaccagcagaccaaggctg
ctggtcacagctgcagtggctgctgggaagggaaacattgataatggttatgaaattgca
gaggttgcaaagtacttggacttcatcaatgtgatgtcctatgacatgggtggagcctgg
gacccattcacacgccacaacagtcccctttaccgtggtgcttcagatgcagaggaagga
gagcacaagtatttcaacgttgactttgccatgaagtactggagggaccagggcacccct
gttgagaagctgatgatgggtttcgccacctatgggcgcacattccgcactgtctctgga
gacaatggtgtcggagccagaacgagtggaccagcctctgctggaccctatacccgcgag
gccggcttctggtcctattatgagatctgtactttcctgaatggagcaactgttgagttg
attgaggatcagatggttccctttgccaccaaaggaaatgagtgggtgggatatgacaac
cgggaaagctatgaaataaaggcacgctatctaaaagacaacaagtttggaggggccatg
atctgggctctggatctggatgactttgctggacaattctgtgggcagggcaactatccc
ctgatcagccatctgcgttatcttctggcctcagatttgccaccccttccttccacaaca
cgtccgccaccccttccttccacaacacgtccgccacccctgccaggaactaccaccagc
agtgtgcccgccaccacctccactcctctgcccggcagtggcttctgtggggggaaagct
gacggcctgtacagtaacaaggaagaccttaatgccttctaccagtgcgccagtggacac
acctacctccagaagtgcgccgctaaccttatcttcaacgagaaatgcaagtgctgtgac
tggaatttgcataacacgagcctggcatag
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