Oncorhynchus nerka (sockeye salmon): 115102347
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Entry
115102347 CDS
T07952
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102347
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Others
115102347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
115102347
NCBI-ProteinID:
XP_029478072
LinkDB
All DBs
Position
LG20:18544114..18569658
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AA seq
836 aa
AA seq
DB search
MFIVECANKRYSGLWAADTVCHVFAVLEDGALAHNLQEQEIEQYYTTNMQKNQLVQNDIR
IAKRLQNEEEEQRAQHGALLSQASRQLQEEDSEYARMIQEEILRCADEEAQRREQEDEEM
AKRIQEEEGLRVRQRSRQESLSDDSASVPASPCPHQPALSTSPIHGEELHHQPATSRWQC
SISNTQPQSDSTAARLSEPYRTAGQNKRTLSSRDRQMDPPRRIRNDLQCPPPDYLSDEGS
EHTDTVFPEHLPPSRPCRQEKRLNTAPSGSMTPVHQPQERSSGSLSRHNRFREDHGKVWE
RGRVEREERGSLQDRDMIWDMNPRVARDVGYDRDPRSEDGRERHYRGRTSDPARGVQDRD
RYEVRRSWTHRETSDKKQVRFQDDTSRRCHSYHGDSRRAGNVWELIAHDLRERGVALRQS
FNGGSRSQRARGRGRDSQVHDGGNTIACNNSRPQRAFQMAICNRPSYHGDVRERSASQRE
SLCHRGHEGGREKIHENLTIEEASGAEVYDEHCRNDRLFSREREGRSSGDPRYKVSSGGD
KEREEGRGDRHYHSQRRVRSEHQLEEEDKKYHSEEEERPPPSQKVSQRSESFCSRGPSIR
ARSKHTHRAGAALQPEKGACLDLGELQQVLLDEELARRLQEEEKLLRRSPPARPSHYQRD
SYPAGDFRVAQVAQDEEIARFMQKQEMKSKRRSRDLDGPGSQREPHDLVDPYDRRTARER
LIQRERLGSDDLPSPTEDCSPDYQAPRPTTQSQQPIRIRNIAEELDPTFKASRQGKEGIR
AGPTISGTSSCQSHPTPHSGLHDFMEEPTFIPPTKRQSDKSVRAKSKEKKENCKQQ
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtttattgttgaatgcgcgaacaaacgatattcgggactgtgggctgcggatacagtg
tgccatgtttttgctgtcctagaggatggagcgttggcacacaacctacaggaacaggaa
attgagcagtactacactaccaacatgcagaagaaccagctggtgcagaatgatatccgc
attgccaagaggctgcagaatgaggaggaggaacagagagctcaacacggagccctccta
agccaggcatctagacaacttcaggaggaggactctgagtacgccaggatgatccaggag
gagatcttgagatgtgctgatgaggaggctcagagaagggagcaggaggacgaggaaatg
gctaaacgcatccaggaagaggaggggctgagggtcagacagaggagtaggcaggagagc
ctcagtgacgacagtgccagcgtccctgcctcgccttgcccacaccagcctgctctcagc
accagccccatacatggagaagagctgcaccatcagcctgctaccagcaggtggcagtgt
tctatctctaacacacagccacagtcagactctacagctgcgcgtctgtctgagccctac
aggacagcaggacagaataaaagaactctatcatcacgtgatagacaaatggatccccct
agacgcatcagaaacgacctccaatgccctccacctgactatctgagtgatgaaggctca
gagcacacagacactgttttccctgaacacctccctccatcccggccgtgtagacaggag
aaacgtctcaacactgcccctagtggttccatgactcctgtgcaccagccacaagagaga
agcagcgggagtctcagccgccacaaccgcttcagagaggaccatggcaaggtttgggag
aggggcagagtagagagggaagaaagggggagtctgcaggacagggatatgatttgggac
atgaatcccagggtagctcgtgatgtgggttatgacagggaccccaggtcagaggatggc
agggagcggcactacagaggaagaactagtgaccctgctagaggggtgcaggatagagac
cgatatgaggtcagaaggagctggacccacagagagaccagcgacaagaaacaagtccgc
ttccaggacgacaccagcagacgctgtcatagttaccatggcgacagcaggcgggcagga
aatgtctgggagctgattgcccatgacttaagagagcggggtgtggccttgaggcaaagc
ttcaacggggggtcacggtcacagcgggcaaggggtaggggcagagacagccaggtgcat
gatgggggaaataccatcgcctgtaacaactctcgaccacagagggcttttcaaatggcc
atctgcaacaggcccagttaccatggagatgtcagggaaaggagtgcctcacaaagagaa
agcctctgtcaccgtggtcatgagggggggagagaaaaaatccatgaaaacctgaccata
gaggaggctagtggggctgaggtctatgatgaacactgtagaaatgataggctgttcagc
agagagagagaggggaggagtagtggagaccccagatacaaggtcagctcaggtggggac
aaggagagggaggagggcaggggcgacaggcactaccatagccagcgcagggtgaggagt
gaacaccagcttgaggaggaggataagaagtaccactccgaggaggaggagagaccccca
ccctcacagaaagtctcccagcgcagcgaaagcttctgcagcagagggccctccatcagg
gccagatccaagcacacccacagagcaggagccgcactgcagccggagaaaggggcatgt
ctggacctgggggagctgcagcaggtgctgctggatgaggagctggccaggaggctgcag
gaggaggagaagctgctgaggaggagccctccagcccgtccctcccactatcaacgcgat
tcctatccagcgggagacttcagagtggcacaagtggcccaggatgaggaaatcgcccgc
ttcatgcagaagcaggaaatgaagtcaaagcgtcgttcacgtgaccttgatggcccgggg
tcacagcgtgaaccgcatgacctggttgacccctatgacaggagaactgccagagagaga
ctgatccagcgggagagactgggctcagatgaccttccatctcctactgaagactgctct
ccagactatcaggcccctagacccacaacccaatcacaacagccaatcagaatcagaaac
attgcagaggaactggacccaactttcaaggccagtagacaaggcaaggagggcatcaga
gcaggaccgacaatctctggcacatcctcctgccagtctcatcccactcctcactctggc
ttacatgattttatggaggagccaacgttcatcccgcccaccaagaggcaaagcgacaaa
tctgtacgcgccaaatccaaagagaagaaggagaactgtaagcagcagtga
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