KEGG   Oncorhynchus nerka (sockeye salmon): 115102365
Entry
115102365         CDS       T07952                                 
Name
(RefSeq) lysine-specific demethylase 5C-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115102365
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115102365
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     115102365
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115102365
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115102365
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD SNAD4
Other DBs
NCBI-GeneID: 115102365
NCBI-ProteinID: XP_029478116
LinkDB
Position
LG20:complement(18990246..19010453)
AA seq 1597 aa
MAMEGEDFVPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DSFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLSKVVI
EEGGFDIVSKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFEVFHTGASLPQTKPKL
YDGEEVHREYKPHSIPLRQSVQPSKTSSYGRRANRLQPDGPEDSAPYPLSTGSQHISTSP
DPTEEDIEKNPELKKLQIYGAGPKMMGLGLVPRNKSIPKKEELPQTVTVRAAAPAVQVKE
QPGEVKEKGGDGSTTTTAPPPSDATIKSEVKKEEENHEGGAAHDSGDQDSGENGDGPCTK
MTMRLRRNLGNPQFVDSFVCRMCGRGDEDEKLLLCDGCDDNYHTFCLLPPLTEAPKGNWR
CPKCVAEECKRPAEAFGFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEREFWR
LVSSIEEDVTVEYGADIHSKEFGSGFPMNNGMKNLSQEEADYARSGWNLNVMPVLEQSLL
CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEQLEE
VMKKLTPELFEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQ
GYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATH
REMFSIVQEERELRKGLLERGITEAEREAFELLPDDERQCDNCKTTCFLSALACSNCTER
LVCLYHTQDLCNCPTDKLYLRYRYTLDELLAMLHRLKVRAESFDSWANRVKEALEQEEGN
KTGVTDLEVLKAEAAEKKFPDNELLQRLNTTLTDTQHCQQTSTELLNKTLTRRMTLAELK
ALVEKMENLPCVISQLEDVQAVLRTIEEFQTQAQALVSDRDWRRDAPPPEQLQALLEQGA
GLPVDAPECELLKGMQEQSRWLGEVRRTMGPEGSEVTLVVLRSLMEAGCIVPQSVSVETA
MAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILSLRGCLSRA
RAWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVRMEELRQLELQVASAHSWRDKASKTF
LKKSSQHSLLQVLCPCVEKRKARGEETGCLDDTDTNTLGLSAQDLRDPGAIVTAFKEGEH
QEKGALLRLQQDNLSKPGVEKKEKEVKTEQEDKENGGGRWGEDPMELDTALHSENCGKGN
GDSNHTTTGSASPPQSVCVCGRAPRPPLLRCHLCKDWFHGGCVPFPSLLLPSAPPTNPLC
WWDWDSRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKE
ALDSPEIQGALEKLQELKQKQPHREGEEEEEDGKKGNSESVIVLSDSEGGEGEGVIDLTE
ENSPKKTPKKEMNGGTQAGCENGISRYNVTGVGSLLPLVPSLKGPVIELSLTTRTQLEEL
QLEGDLLEVSLDQTSTIHRVLQAASEPQRHTLQTLILIELQEQKGAGRGGRAKDKRKRKS
QRGDTGAEGGPRSQDTSESKKTRPLNHIPIQTHPEIL
NT seq 4794 nt   +upstreamnt  +downstreamnt
atggcgatggagggggaagattttgtgcctcctccggagtgcccagtgttcgagccgtca
tgggaggagtttcaggatcccctgggctacattgccaagatccgtccaattgcagagaag
tctggaatctgcaagattcgtcctcctgctgactggcagccaccctttgctgtggaggtg
gatagcttccgcttcacaccccgtatacagagactcaatgagctggaggcggagacacga
gtcaagctaaactacttggaccggatcgccaagttctgggagatccagggatcctctctc
aagatcccgaacatcgagaggcgcatcctggacctcttcagcctgtccaaggttgtgata
gaggagggagggtttgatatagtcagtaaggagaggcgctgggctcgcgtggcccagaag
cttggctaccctccaggcaagaacattggctccctcctgcgctcacactacgagaggatt
gtctacccctttgaggtgttccacactggtgccagcctgccgcagactaagccaaagcta
tatgatggagaggaggtgcatagagaatacaagccccactccatccccctacgccagtct
gtccagccctccaagacgagcagctacggacgcagagccaatcgtctccagccagacggt
ccagaggattctgccccctaccctctctccactggctctcaacacatctctacatcgcct
gatcccacagaggaggacatagagaagaatccagagctgaagaaactacagatttatggt
gcagggcctaagatgatggggctaggactggtgcccaggaataagagcattcccaagaaa
gaagagctgcctcagactgtgactgtccgggctgcagctcctgctgtccaggtcaaggag
cagccaggggaggtcaaagagaaaggaggagatggcagcacaaccacaacggctcctcct
ccctctgatgccacaataaagagtgaggtgaagaaagaggaagagaaccatgaaggtgga
gcagctcatgacagcggggaccaagacagtggtgaaaacggtgacgggccctgcaccaag
atgaccatgaggctgagacgtaacctcggcaaccctcagtttgtggattcgtttgtgtgc
cggatgtgtggccgtggcgacgaggatgagaagctcctgctgtgtgacggttgtgatgac
aactaccacactttctgtctgctgccccctctcactgaggcccccaagggcaactggcgc
tgtccaaaatgtgtggctgaggagtgtaagaggccagcggaggcctttggttttgagcag
gctactagggaatacaccctgcagagttttggggagatggccgacaccttcaaagcagac
tacttcaacatgcctgtccatatggttccgacagagctggtggagagagagttctggcgg
ttggtcagtagtatagaggaggacgtgacagtggagtatggagccgacatccactctaaa
gagtttggcagtggattccccatgaacaacggcatgaagaacctctcacaagaggaagcg
gactatgcccggagcggctggaacctgaacgtgatgccagttctggagcagtccctgctg
tgccacatcaacgcagacatctctggcatgaaggtgccgtggctctacgtgggcatggtc
ttctctgctttctgctggcacatcgaagaccactggagctactccatcaactacctgcac
tggggtgagcctaagacgtggtacggggttccctctgtagcagcagagcagttagaggag
gtgatgaagaagctgaccccagagctgtttgagttccagcctgacctcctccaccagctg
gtcactattatgaaccccaacatcctcatggctcacggggtcccggttgtgcgtaccaac
caatgtgctggcgagtttgtcatcactttccccagagcctaccacagcggcttcaatcag
ggatacaactttgctgaagctgtaaacttttgcactgcagactggctgcccgcaggccgc
tcctgtatcgagcactaccgtcgtctgagacggtactgtgttttctcccacgaggagctg
acctgtaagatggccgcctgcccagagaagctagacctcaacctggccgctgccacgcac
agagagatgttcagcatcgtccaggaggagagggagctacgcaagggcttgctggagagg
ggcatcacagaggctgagagggaggcgtttgagctgctacctgatgatgagaggcagtgt
gataattgcaagaccacctgcttcctgtcggccctggcctgttcaaactgcactgaacgc
ctcgtctgtctctaccacactcaggacctctgtaactgccccacagacaaactctacctc
aggtacaggtacacactggatgagctgctggccatgttacaccggctcaaagtgcgagct
gagtcgtttgattcctgggccaacagagtgaaagaggctctggagcaggaagagggcaac
aagacaggtgtcacggatctggaggtgctgaaggcagaggcagcagagaagaagtttcct
gacaatgagctgctccagagactcaacactaccctcactgacacgcagcactgtcagcag
accagcactgagctcctcaacaagacactgaccaggaggatgaccctggctgaactcaag
gctctagtggagaagatggagaacctgccctgtgtgataagccagctggaggacgtacag
gcggtcctgcgtacgatagaggaattccagactcaggcccaggctctagtgagcgacagg
gactggcggcgagacgcccctcccccagagcagcttcaggccctgttggagcagggggct
ggcttacctgtcgatgcacctgagtgtgagctcctgaaggggatgcaggagcagagccgc
tggctaggcgaggtgcgccggaccatgggtcccgaggggagtgaggtgaccctggtggtc
ctcaggagcctgatggaggcgggctgcatcgtgccccagagcgtctctgtggaaacggcc
atggcagaactgcaggagctgctgacgatagcagaacgctgggaggagaaggcccagatc
tgtttggagcaacggcagaagcaccctctgtccaccttggaggccatagtgaacgaggcc
cagctcatcccagtcaagctgcccaacatcctctctctccggggctgtctgagccgggcc
agggcctgggtcactgacctggaggagatccagaatggggagcactacccgtgtctggat
gacctggagggcctggtggcgatagggagagacctgccagtcaggatggaggagctgagg
cagctggagctgcaggtagccagcgcccactcgtggagagacaaggcctccaagaccttc
ctgaagaagagcagccagcacagcctgctacaggtgttgtgtccgtgcgtggagaagcgt
aaagcgaggggggaggagacgggttgtttagatgacaccgataccaacactctgggcctt
tctgctcaggacctgagagaccctggagccattgtgacggcgtttaaagaaggagagcac
caggagaaaggggctctgctgaggctccagcaggacaacctgtctaaaccaggtgtggag
aagaaagagaaagaggtaaagactgagcaggaggacaaggagaacggaggtgggaggtgg
ggggaggaccccatggagctggacacagctctccactctgagaactgtggaaaggggaac
ggggacagtaaccacacaacgacaggcagtgcctctcctccccagtcagtgtgtgtgtgt
ggccgggcgcctcgccctcctctgctgcgctgccacctgtgtaaagactggttccacggt
gggtgtgtcccgttcccctccctcctgctcccctcagcgccccccaccaaccccctctgc
tggtgggactgggactcacgcttcctgtgcccccggtgccagcgctcacggcgcccgcgt
ctggagaccatcctggccctgctggtggcgctccagaggctgcccgtccgtctgccagag
ggagaggctctgcagtgtctcacagagagggccatcacctggcaggggcgcgccaaggag
gcactggacagcccagagatacagggggcactagagaagctgcaggagcttaaacagaag
cagcctcacagggagggagaggaggaggaggaggatgggaagaaagggaactctgagtcg
gtgatagtgctgtcggattctgagggaggggagggagagggagtgatagacctcacagag
gagaactctcccaagaagaccccaaagaaagagatgaacggtggcacgcaggctggatgt
gaaaacggcataagccgttacaatgtaacaggtgtgggctctctgctgccgctggtccct
tcactaaaaggcccagtgatagagctgtccctgaccaccaggacccagctagaggagttg
cagctggagggagacctgctggaggtgtctctggaccagaccagcaccatccacagggtc
ctccaggctgcttcagagccacagagacacacactccaaacactcatactgattgagctc
caggagcagaaaggggcgggccgtggggggcgggccaaggacaagaggaagaggaagagc
cagaggggcgacacaggggcggagggaggaccccggtcccaggacacctcagagtccaag
aagacccggcccctcaaccacattcccatccagacacaccctgagatcttatga

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