Oncorhynchus nerka (sockeye salmon): 115102370
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Entry
115102370 CDS
T07952
Name
(RefSeq) G-patch domain and KOW motifs-containing protein-like isoform X1
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115102370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115102370
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115102370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
KOW7_SPT5
KOW2_Spt5
CCDC47
KN17_SH3
Motif
Other DBs
NCBI-GeneID:
115102370
NCBI-ProteinID:
XP_029478129
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Position
LG20:19123339..19141372
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AA seq
518 aa
AA seq
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MAASQQEQNSRNVPVDTSTSNAHQQQGERKSGAISFGFSKTVSKLKSSRDEAINADERDY
LTRVDGKELLSIKPVEKPKELIIPLIQRNRWCSRQENRAGQGHGDGGGDKAKTQPPSQEQ
DSVESQAVKEIIEESQRQLDQWKNGDQADPNLTIPLLMQNQAPQGFEDGDHIKVDLRPES
STEADYDSVPVEVYGLAMLKGMGWKAGEGIGRTFKQDVKPIEHQLRPKGLGLGADRSAIR
DLEPSGPRRPPKPGDERKEETLVLGPGGHVLVESGAHKDLYGKIEGVDPDNARVVVKLAI
GSKTVTISQYALKLVDRTEYDKNGKDLSRLSRAHKEKEKEKEQQRREEKERRSNKEEERK
KSRSSETDRDGGKDQRKRKHRDSSQDREKPQAKLPPAAPSWLQRDLKVRFVDKAFKGGKY
YNSKMQIEDVLSPNICVCRTEEGRFLDDVKQTMLETIVPKTDSEDIMVVLGEHRGQVGRI
LQRDRDRSRAMVQLDRYEEKVFTLDYDSICHYVGGGDH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctcaacaggagcaaaacagcaggaacgttcctgttgatacatcaacatct
aatgcacatcaacaacaaggagagaggaaatcaggggctatatcttttggttttagcaaa
actgtaagtaaattaaaatctagtcgggatgaagctatcaacgcagatgagcgagattat
ttaaccagagtcgatgggaaagaattgctaagtatcaagcctgtggagaagccgaaggag
ctgatcattccactcatccaaaggaatcgctggtgcagcaggcaggaaaacagagctggc
caggggcacggtgatggtgggggggataaggccaaaacacaacccccctctcaggagcag
gactccgtggaatcacaggctgtcaaagaaattattgaagaatctcagaggcagcttgac
cagtggaaaaatggggaccaagcagaccccaacctcaccatccccctgctgatgcagaac
caggctccacaggggtttgaggatggagaccacatcaaggtggacctgcgaccagagtct
tccacagaggcagactatgacagtgttcctgtggaggtgtacgggttagccatgctgaag
gggatgggctggaaggccggagagggcatcgggcggaccttcaaacaggatgtgaagccc
atagagcatcaactgaggccgaagggtctgggtctgggagctgaccgctctgctatacgg
gacctggagcccagcgggccccggaggcctcccaagccaggtgatgagcggaaggaggag
accctggtcctggggcctggaggccatgtgctggtggagtctggagcacacaaggacctg
tacgggaagattgaaggagttgatccggacaatgcacgagtagtggtcaagcttgcgatt
ggtagcaagactgtgacaatcagtcaatatgcactgaaactggttgaccgcacagaatat
gacaaaaacggcaaagacctcagtcgcctcagcagggcccacaaagagaaggagaaagag
aaggagcagcagagacgggaggagaaagagaggaggagtaataaggaagaggagaggaag
aaaagtagatcttctgagacggacagggatggagggaaggaccagagaaaaaggaaacat
cgggattctagtcaggacagagagaagccccaggcaaagctacctcctgctgccccctcc
tggctccagagggacctgaaagttcgctttgtagataaagccttcaaagggggaaaatac
tacaattcaaagatgcaaatagaggatgtcttgtcgccaaacatctgtgtgtgtcgtact
gaggagggcagattcttagatgatgtgaaacagacgatgctggagaccattgtgccaaag
actgactctgaggacatcatggttgtacttggcgaacacagggggcaggtaggtcgtatt
ctccagagggaccgagacaggagcagagccatggtgcagctggacagatatgaggagaaa
gtcttcaccctggactatgactccatctgccattacgtaggagggggagatcactga
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