Oncorhynchus nerka (sockeye salmon): 115102437
Help
Entry
115102437 CDS
T07952
Name
(RefSeq) transcription factor CP2-like isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102437
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
115102437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CP2
SAM_3
Motif
Other DBs
NCBI-GeneID:
115102437
NCBI-ProteinID:
XP_029478241
LinkDB
All DBs
Position
LG20:20451390..20467501
Genome browser
AA seq
571 aa
AA seq
DB search
MVAGLASQLTWFQSLVAKYIYQAVRNLQFGILWPGIENLRQVRLQSDPRVVMAWALKLPL
TDEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESNLPPDSENKILPFQY
VLCAATSPAIKLHDETLTYLNQGQSYETRMLDNRKLGELPEITGKMVKSIIRVVFHDRRL
QYAEHQQLEGWRWNRPGDRILDLDIPMSVGMVDPRANPTQLNTVEFLWDPSKRTSVFIQV
HCISTEFTMRKHGGEKGVPFRIQIDTFKENDGEDYTEHLHSASCQVKVFKPKGADRKQKT
DREKMEKRAPQEKEKYQPSYETTILTECSPWPEVTYVNNSPSPGFNSSHNSFPVAEGNGS
PSHQPELVVQVADIESCLTDTILPSHLLTIDGESIHQNLLPAATPQDAQQWLHRNRFSPF
CRLFTNFSGTDLLKLTREDVIQICGPADGIRLFNALKGRVVRPRLTVYVCQESQQAREQQ
QKHENGDAASSTFFVYHAIYLEDLTAVELTEKIAQLFNISPRQISQIFKQGPTGIHVLVS
DEMIQNFQDEVCFVLDTMKAETNDGYHIILK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagggttagctagtcaacttacttggtttcaaagtttggtagcaaaatacatc
taccaggctgtaagaaatttgcagtttggaattttgtggccagggatcgagaatttgaga
caagttcgactgcaatcagatccacgcgtcgtcatggcttgggctctgaagctgccactc
actgatgaggtgattgaatcaggtctggtccaagactttgatgccagtctctctggcatt
ggacaagagcttggagctggggcgtacagtatgagcgacgtgctggccctccccatcttt
aagcaggaggagtctaacctgccgcctgacagtgagaacaagattcttcctttccagtat
gttctgtgtgcagctacctcgcctgctatcaaactgcacgatgaaacacttacctacctc
aaccaaggacagtcttatgaaactcgaatgcttgacaatcggaaattgggtgaactccca
gaaatcactggcaaaatggtgaagagcatcatccgcgtggtcttccatgatcggcgtctt
cagtacgcagagcaccagcagctggagggctggcgctggaacaggcctggagaccgcatc
cttgacctggatatccccatgtcagttggcatggtcgaccccagggctaaccctactcaa
cttaacactgtggagttcctgtgggacccttcaaaaagaacctcggtttttatccaggtt
cactgcatcagcacagagttcactatgcggaagcacgggggagagaagggcgtgcctttc
cgcatccagatcgacactttcaaagagaatgatggcgaagactatacagagcacttgcat
tctgccagctgtcaggtcaaagtcttcaagcctaaaggtgcagacaggaagcagaagacc
gacagagagaagatggaaaagagggctcctcaggagaaggagaaataccagccctcgtat
gaaaccaccatcctaacagagtgctctccctggccagaggtcacctatgtaaataactct
ccatcgcctggcttcaacagctcacacaacagttttccagtggcagagggcaatggatcc
cccagtcaccagccagaactagttgttcaggtagcagatattgaaagctgtctgactgat
acaattttgccatcccatctacttacaatagacggggaaagcatccatcagaacctgtta
cccgcggcaacaccacaggatgcacagcagtggctccatagaaaccgcttttcaccgttc
tgtcggctcttcactaatttctcaggaactgatctgttgaagctgaccagggaagatgtc
attcaaatatgtgggccagcagatggtattaggctcttcaacgcgttgaagggacgggtt
gtacgtcccaggctgacggtgtatgtgtgccaggaatcccagcaggctcgggaacagcag
cagaaacacgagaacggagacgcagctagcagtacttttttcgtgtaccatgccatctac
ttggaggacttgacagcagttgagctgacagagaagatcgctcagctcttcaacatctca
cccagacagatcagtcagatctttaaacagggacccactggtatacatgtcctggtcagt
gacgagatgattcaaaacttccaggatgaagtatgttttgttttggatacaatgaaagct
gagacgaatgacggctaccacatcatcctgaaatga
DBGET
integrated database retrieval system
