Oncorhynchus nerka (sockeye salmon): 115102439 Help Entry 115102439         CDS       T07952                                  Name (RefSeq) integrin alpha-5-like   KO K06484   integrin alpha 5 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one03266   Virion - Herpesvirus one04145   Phagocytosis one04510   Focal adhesion one04512   ECM-receptor interaction one04517   IgSF CAM signaling one04518   Integrin signaling one04810   Regulation of actin cytoskeleton one04820   Cytoskeleton in muscle cells one05100   Bacterial invasion of epithelial cells one05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     115102439  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115102439    04517 IgSF CAM signaling     115102439    04518 Integrin signaling     115102439  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     115102439   09144 Cellular community - eukaryotes    04510 Focal adhesion     115102439   09142 Cell motility    04820 Cytoskeleton in muscle cells     115102439    04810 Regulation of actin cytoskeleton     115102439  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     115102439   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     115102439  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:one04147]     115102439    04515 Cell adhesion molecules [BR:one04515]     115102439    04090 CD molecules [BR:one04090]     115102439 Exosome [BR:one04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    115102439 Cell adhesion molecules [BR:one04515]  Integrins   Integrin alpha subunits    115102439 CD molecules [BR:one04090]  Proteins   115102439 SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha Motif Other DBs NCBI-GeneID:  115102439 NCBI-ProteinID:  XP_029478246 LinkDB All DBs Position LG20:20547421..20599454 Genome browser AA seq 1054 aa AA seqDB search MGSRRYRSEKPGEVNYPFCCIGVCLIIILQLCAAFNLDVENPTVYSGPNGSYFGYSVEFY LTNSSSVSVVIGAPKANTSQRNITEGGSVYYCPWSLGQSECHNIEFDNQGDRTVTLNNTD YQAEVKSHQWFGATVRSHDDTILACAPLYSWRTKEDMPQSDTTGTCYLSVKNFTKFVEYA PCRTEFINEGGQGYCQGGFSADFTKDGKVVLGGPGSFFWQGQVISAAKEEIIKAYYPGYF MQSVEGQIQTRQAQLKYDDSYRGYSVAVGEFSGDEVEDFVAGVPKGVMLYGLVSVLNGTD LKSMLDYTGEQMGSYFGYAVATADINNDGMADLLVGAPMYMTRGSDSRLEEVGRVYVYLQ RGPLNLEPTLNLTGTQVFGRFGSTIAALGDLNQDGYNDVAISCPFGGDDKQGLVLIYNGF VGGLRDTPSQVIAGQWASGTVPASFGFALRGAKDLDMNGYPDLIVGAFGVDKTVLYRSRP IVNTSASLTVYPTMINPEEKSCSVNNGNTTIPVSCVNLSFCLSANGKYLPDNLDFQVEVQ LDRLKHKQKGGVKRALFVDSQQTVLTRSVRVRNRERVCHDTKIYLRDDKEFRDKLSPIYI SLNFSLDPQAAFDSHGLRPILNYQSTELIEQKAQILLDCGEDNICVPDLKLAVHGDRKEV YLGDDNSLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYETENQT RYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTRKTVQFELQIRSKNENNSHSEVVPYRLEV VVQADVILQGVSRPDKVFFPPPNWKVSKSPQVEQDIGLAVQHVYELVNKGPSGISHTVFQ LSCPLSVQGQGLLYPLEISTEGPLNCTTNHSINYMQLKLQQSSTEQPPLLVPGQDHHIER RDVHRDQLAEHTNLSCSNVECWTLQCDVGLLEKGTSAILKVRSRIWAETFIERAYKGYVL ECLARFSVIKMPYAILPKELPSGSKKVVTPVVWNKPDSQYSVPMWIIILAILAGLLLLAL VIYVLYKLGFFKRSLPYGTAMEKAQLKPHATSEA NT seq 3165 nt NT seq  +upstreamnt  +downstreamnt atgggttccagaagataccgttcggagaagccgggagaagtgaactacccattctgctgc attggggtttgtctgataattatcctacagttgtgtgctgcgttcaacttggacgtggaa aaccccacggtctacagcggacctaatgggagctactttggatattccgtggaattttac ttgaccaattcttcaagtgtcagtgtggtgatcggtgctcccaaggccaataccagccag cgcaacatcacagagggcgggtccgtgtactactgcccatggagtctcggccaatcagag tgccacaacattgagtttgacaatcaaggggaccgaacagtcacactcaacaacacagac taccaggctgaagtcaagtcccaccagtggttcggcgccaccgtccgttcccacgacgac accattctggcctgcgcccctctgtactcctggaggaccaaagaagacatgccccagtca gataccacaggaacctgctacctctctgtcaagaacttcactaagtttgtggaatatgct ccctgtcgcacagaattcattaacgagggaggccagggctactgtcaggggggattcagt gctgatttcaccaaggatgggaaagtggtgcttggaggaccaggcagcttcttctggcaa ggtcaggtgatctcagcagccaaagaagagatcatcaaggcttactacccagggtacttc atgcagtctgtagagggacagatccagaccagacaggctcagctcaaatatgacgacagc taccgcggttactctgttgcggtcggggaattcagtggagatgaggtggaagattttgtg gctggtgtcccaaaaggagtcatgctatacggtttggtgtctgttttaaatggcaccgat ctgaagtctatgctcgactacactggtgaacagatgggctcctattttgggtatgccgtg gccacagctgacatcaataacgacggcatggctgacctgttggtgggagctcccatgtat atgacccgggggtcagacagtcgcctggaggaggtgggccgtgtgtacgtctatctgcaa cgtggacccctgaacctggagccaaccctcaacctgaccggaacccaggtgttcgggagg tttggtagcaccatcgccgctctgggtgatctcaaccaggacggatacaatgatgtggcc atcagctgtccattcggtggagatgacaagcagggattggttctcatctacaacggattt gttggtgggctcagggacaccccctctcaggtcatagctggccaatgggcttcaggcact gtgcccgcaagctttggatttgccctccgaggggctaaagacctggacatgaatggttac ccagatcttattgttggtgcttttggagttgacaagacagttctgtacagatcccggccc atcgtcaacaccagtgcctccctgactgtctaccccaccatgatcaaccctgaggagaag agttgttcagtcaacaacggcaacaccaccatccctgtctcctgtgtcaacctgagtttc tgcctctcggccaatgggaagtacctcccagacaacctagacttccaggtagaggtgcag ttggaccgtctgaagcacaagcagaagggaggggtgaagagggctctgtttgtagactcc cagcagacagtgctcacgaggagtgtgagggtgcggaacagagagcgtgtgtgtcatgac accaagatctatctgagggatgataaggagttcagagataagctctcccccatctacatc tccctcaacttcagtctggatcctcaggcagctttcgactcccacggcctcagacccatc ctcaactaccagtccaccgagctcatcgagcagaaggcccagattctgctggactgtgga gaagacaacatttgtgttcctgacttaaagctggcggtgcacggggaccggaaggaagtg tacctaggtgacgacaactcactgaccttgactttcaacgctcggaacgagggtgaagga ggggcctacgaggctgagctgtacgtggtgctgcctcctgaagcggactacagcggtata gcccgcaataacgagagcctgacccagctaacttgtagctacgagacagagaaccagacc cgctacctcagctgtgacctgggcaaccctatgaagtctggcaccagcctgtgggcaggt ctgcgcttcactgtgccgcgactgaaggacacgcggaagacggttcagtttgagctgcag atccgcagtaaaaatgagaataattcccacagcgaggtggttccctacaggttggaggtg gttgtccaggccgatgttattttacaaggagtctcccggccagacaaggtcttcttccct cctcccaactggaaggtgtccaagagcccccaggtggagcaggacatcgggcttgcagtc caacacgtctatgagctggtgaacaaaggccccagtggtattagccacacagtgtttcag ctcagttgtcctctcagtgttcagggccagggtctcctctaccctctggagatctctact gagggacccctcaactgcaccaccaaccactccatcaactacatgcagctcaagctccag cagtcgtccacagagcagcctcccctacttgtgcctggccaggatcaccacatcgagagg agagacgtccacagagaccagttggctgagcacactaacctgtcctgctctaatgtagaa tgctggacgctgcagtgtgacgttggtcttctggagaaggggaccagcgccatcctcaaa gtgcgctcacgcatctgggctgagaccttcatcgagagagcatacaaagggtatgtgctt gagtgcctggcaagattcagtgtgatcaagatgccctatgccatcttacccaaggaacta ccaagtggatctaaaaaggtggtgaccccggtggtgtggaacaagccggacagccagtac tctgtgccaatgtggatcatcatcttggccatactagctggacttcttctgctggcactg gtgatttacgtcctgtacaaacttggcttcttcaagaggtcgctaccctacggcacggct atggagaaggcccaactcaagccccatgctacgtctgaggcctaa

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