Oncorhynchus nerka (sockeye salmon): 115102489
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Entry
115102489 CDS
T07952
Name
(RefSeq) teashirt homolog 2-like
KO
K09236
teashirt
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102489
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115102489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_TSHZ3
zf-C2H2_4
zf-C2H2_2
zf-C2H2
Zap1_zf1
zf-C2H2_3rep
Zf-C2H2_ZNF451_C
zf-C2H2_6
Homeobox_KN
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
115102489
NCBI-ProteinID:
XP_029478356
LinkDB
All DBs
Position
LG20:complement(23039377..23083654)
Genome browser
AA seq
1034 aa
AA seq
DB search
MPRRKQQAPKRAAVYEPDEDGIMQETIPEDDRENATPTEEESSEKTSPKASEDKEMDNKS
SNSYSYQNSPVSVLSNQEAELESRLSDASDRLSLSDFKMASPPESQKVEESSGSKHKDDM
HSSLERMRAAYANFLSDSYWTGIGMDLKIGKTPSKANCDSTNGSTKNEFDWHQDALSKTF
QQTQSPRTVSKPNLFSSVHLYRQSSKAGGTVFTGASRFKCKDCSAAYDSIVDLTVHMNKS
GHYQDNNHGKPSNASTSSKSRKRNLQDMEGKDDAQKVLKCMFCGHSFESLQDLSVHMIKT
KHYQKVPLKEPIPVLSPKLLPPAKKRAYEANRPCSPDSTTGLAGYSEAQRSAAISNANSN
RYGYQNGASYTWQFETCKSQILKCMECGSSHDTLQQLTTHMMVTGHFIKVTNSASKKGKQ
LALDPLAIEKMQVLAEPLANETEGDKVSPITASPGDSEKDNQRDGTLDKIEESQVKDDKA
ESKDQKAGEGAFKYPYLREEDLEQQGSSGGGGDILKSLANTVASAINKAQTGTPSWSAYP
SIHAAYQLSGIIKSSNPLSASAPIQLKQTFNHKLRSIAPKGKFLQGAGGVETQKGQQQHQ
NADIKKEKVGISDGKESPNIKFDLAENDDSDCQDNFSTSSKLEADCLNEGSDAIKGKLSP
EFLDRGKTPSPPASNGRSTTSELVNDTPEILGINPLSALQSVLNNHLGKAKKPTNSRSEN
SQLSACSQSIFAELNRSMEKPAVVHATPARNRVNNAFLFTGNDQPIDLTKYKPNKPSSSH
LRPSAPMTQTHALSDIADMVKVLPKATTPKSSMPSRIPTMKLETDVRCFEDLSAEVYSVH
KRKGRQSNWNPRHLLILQAQFASSLFLTSEGKYLLSDLGPQERMHISKFTGLSMTTISHW
LANVKYQLRKTGGTKFLKSMDTGHPIFYCNDCASQFRTPPAFISHLESHLGFQIKDMCKL
PIEHQTKVEKPELSKALSFRATETLVTEEDVDAKFKCKLCCRTFASNHAVKLHLSKTHSK
SPENHSQYVEMDKE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggagaaaacagcaggcgccgaaacgggctgcggtatatgagcctgatgaagat
ggcatcatgcaagagaccatccctgaggatgacagagagaatgccactccaactgaagag
gagagttctgagaagacaagtcccaaggcctcagaggacaaagagatggacaacaaaagc
agtaacagctacagctaccagaattcccccgtcagtgtcctttccaatcaagaggccgag
ttggagtcacgccttagcgacgccagcgatagactctcgctctcagacttcaaaatggcc
tcaccacctgaaagtcagaaagtcgaggagagcagcggttcgaaacacaaggatgacatg
cacagcagtctggagagaatgagggctgcgtatgctaactttctctcagattcctactgg
acagggattgggatggacttgaaaattggcaaaacacccagcaaagccaactgtgacagc
accaatgggagcaccaagaatgaatttgactggcaccaggatgcactctccaaaaccttc
cagcaaacccaatccccaaggactgtgtccaaacccaacctcttcagctcggtccacctc
tacagacagagcagcaaagcaggtgggacggtgttcacaggagcaagtcggttcaagtgt
aaggactgtagtgctgcctacgactctattgtggatttaacagtgcacatgaacaagagc
ggacattaccaggacaacaaccacggaaaaccgagcaatgcctccacgtcctccaaatca
agaaaaagaaatttgcaagacatggaagggaaagacgatgcacagaaagttctgaaatgt
atgttctgtggccattcttttgaatccctccaggacttgagtgtccatatgataaaaaca
aagcattaccaaaaagtgcctttgaaagaaccaatcccagtactctcacccaaattactg
ccaccagcaaagaaacgggcctacgaagcaaatagaccttgttctcctgattctacgaca
gggttagctggttacagcgaggcccaacggtccgcggctatttcaaatgctaacagtaat
cgttatggttatcagaatggggctagctacacttggcagtttgagacatgcaagtctcag
attctgaaatgcatggagtgtgggagctcccatgataccctgcaacagctcaccactcat
atgatggtcactggacatttcataaaagttacaaactccgcctctaagaaggggaaacag
ttagctctggatcccttggctatagagaagatgcaggtattagctgagcctcttgctaat
gaaactgaaggcgataaagtgtctccaataactgcttccccaggggacagtgagaaagat
aaccagagggacggcacattggacaaaattgaagaaagtcaagtgaaggatgacaaggca
gagagtaaggatcaaaaggcaggggaaggggcatttaaatatccatatctccgcgaggag
gatctggagcagcagggatcgtcaggtggaggaggggatatcctcaagtctttagccaac
acagtggcctctgcaatcaacaaggctcagactgggacccccagctggagtgcctacccc
agtatccacgctgcctatcaactctctgggatcatcaagagcagcaatcccctctcagcg
tctgcccctattcagctaaagcagacattcaaccacaagctcagatcgatcgccccaaag
gggaagtttcttcagggcgctgggggagttgaaactcagaagggacagcaacagcatcaa
aatgcggacatcaaaaaagaaaaggttggcattagcgatggtaaagaaagtccgaatatt
aagtttgatctggcggagaatgatgacagcgattgtcaggacaatttctctacctcttca
aagctcgaagcagactgtctgaatgaagggagtgatgcgatcaaagggaagttgagccca
gagttcttagacagaggcaagacaccaagccctcctgccagcaatggacgaagcactact
tcagagcttgtcaatgacaccccagaaatactgggcataaaccctctaagtgcactgcag
tcagttctgaacaatcatttgggtaaagcaaaaaagcccaccaattcaagatctgaaaac
agtcaactctctgcttgctctcaatctatattcgctgaactcaaccggagtatggagaaa
ccagcagtggtgcatgccacccctgctaggaacagagttaacaatgcctttctgtttact
ggcaatgatcagccaatagacctgacaaaatataaacctaacaagccaagttcctcacat
ctacggccatctgccccaatgacacagacacacgctctgtctgacattgctgacatggtc
aaggttcttcctaaagccaccacaccaaaatcatccatgccatcgaggatacccaccatg
aaactggaaacagacgtgagatgctttgaggatttgtcggctgaggtatactcggttcac
aagcgtaagggaaggcagtcaaactggaacccccggcatcttctcatcctccaagcccag
ttcgcctccagcctctttctgacttctgagggcaagtacttactctcagatcttggtcct
caggaacgaatgcacatctccaagtttactggactgtccatgacaaccatcagccattgg
ttggccaatgtgaaataccaacttaggaaaacagggggaaccaagtttctgaagagcatg
gacactggccatccgatcttctactgcaatgactgtgcttcccagttcaggacaccacca
gccttcatctcccacctggaatcacacctagggttccaaatcaaagatatgtgcaaactg
cctatcgaacatcagacgaaggtagagaagccagaactgtctaaggctctcagtttccgg
gcaacagagacgctagtcactgaggaggacgttgacgctaagttcaaatgtaagctgtgc
tgtaggacatttgctagtaaccatgcggttaaacttcacttgagtaaaactcacagcaaa
tcccctgagaaccattcacaatatgtggaaatggacaaagagtag
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integrated database retrieval system