KEGG   Oncorhynchus nerka (sockeye salmon): 115102536
Entry
115102536         CDS       T07952                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115102536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115102536
   03041 Spliceosome [BR:one03041]
    115102536
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115102536
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115102536
Spliceosome [BR:one03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115102536
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 115102536
NCBI-ProteinID: XP_029478454
LinkDB
Position
LG20:complement(24346308..24351390)
AA seq 402 aa
MSKEAPREPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFVT
YSGVNEVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHL
RDYFEQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKAL
SRQEMQTTGVGMRGGRGGGGNYGRGGGYGGNDFDRDGGYFDGRGGRGGGYGGGDGGYNNG
YGGGDGGYGGGPGGYGGGNRGYGGGQGYGGGQGGGYGGGNGYNDYNNGNGGNFGGGKSMA
SPQEAAPVGGNFGGGGGGGGNNYNDFGNYNNQASNYGPMKGNNFGGSGGGGGGSGGGSSG
GSGGGGGGRSSGPYGGGYGGNSGGGGGGGGGGYGGGSGGRRF
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgtcgaaggaggccccacgtgaacccgagcagctccgcaaactgttcatcggaggtctg
agcttcgaaaccacggatgagagtttgcgagaacacttcgaacaatggggatctcttaca
gattgtgtggtcatgagagatccagccaacaaacgctctagaggttttgggtttgtcacc
tactccggtgtgaacgaggtcgatgctgccatggaagcacgcccccataaggttgatggt
aggctggtagagcccaagagggctgtttccagagaggactctagccgtccgggcgctcat
gtcacagtgaaaaagatatttgttggaggtatcaaggaagacactgaagactcccaccta
cgagactactttgagcaatttggcaagattgaagtaatcgacattatgaccgaccgcacc
agtggcaagaagaggggcttcgcctttgtcacgtttgatgaccatgatgcagtggacagg
attgtcatccagaaataccacactttgaacggtcacaattgcgaagtgaggaaagctttg
tccagacaggagatgcagacaacaggagtgggtatgaggggtggccgcggaggtggcggt
aactatggcagaggtggaggatatggaggtaatgattttgaccgtgatggtggatacttc
gatggccgtggaggcagagggggtggatacggaggaggagatggcggttacaacaatggt
tatgggggaggtgatggtggctatggtggaggccctggtggttatggcggcggtaaccgc
ggctacggcggagggcaaggttatggtggtggacagggtggcggctacggtggtggaaat
ggctataacgactacaacaatggcaatggtggaaactttggtggcggtaagtccatggct
tccccacaagaagcagccccagttggtgggaactttggcggcggtggtggtggcggcggc
aacaactacaatgactttggcaactacaacaaccaggcttccaactacggcccaatgaag
ggtaacaactttggaggcagcggtggaggtggtgggggtagcggtggtggcagcagtggt
ggaagcggcggtggcggcggtggcaggagtagcggcccatatggaggtggatatggaggt
aactctggaggtggtggtggtggcggcggcggtggatatggcgggggctccggtggacga
cgattctaa

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