Oncorhynchus nerka (sockeye salmon): 115102539
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Entry
115102539 CDS
T07952
Name
(RefSeq) homeobox protein Hox-C10a-like
KO
K17444
homrobox protein Hox-C10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102539
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
115102539
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
115102539
NCBI-ProteinID:
XP_029478467
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All DBs
Position
LG20:complement(24504938..24508299)
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AA seq
341 aa
AA seq
DB search
MSCQDNMAAGHFLMDSLMGGSSSYRGEGYSNSNHGMYIHPAASEYGCSMMRHFGVVGSKK
DEVPLSSHPLGSYQDAPYLSSQLGTWTSASKTNRDEQPVAQSSLQPCSFPTDNVKEEAFC
CLYQGDSSSRANKDATESATYIRLGNNSSSQTDQTAVSATSECYGGEKQVYPRGSRGQRK
EQVGTGFASLDQVTTSVESPRESTVKMSKSTQETVSEEMSNEKAKQGKSMKEESAKTDSC
SDNSDSELKDDFTLENAPGNWLKATSGRKKRCPYTKHQTLELEKEFLYNMYLSRERRLEI
SKSIDLTDRQVKIWFQNRRMKLKKLNKECRGRDHMAVHNFT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgccaggataacatggctgcgggtcatttccttatggattctttgatgggagga
tcatcttcctatagaggcgaaggctactccaacagcaaccatggaatgtacatccaccca
gctgcatctgagtatggatgctcaatgatgagacattttggagtagttggatcgaaaaaa
gacgaggttcctctgagcagccaccctctcggctcctaccaagatgcgccttacctgtca
tcccaactgggcacatggacctcggcttccaaaactaacagggacgagcaacctgttgcc
cagtccagtttacaaccgtgttcgtttccaaccgacaacgtcaaagaggaggcgttctgt
tgtctgtatcagggtgacagtagcagcagggctaataaggacgctacagagtcggctact
tacatccggcttgggaacaatagtagcagccagaccgaccaaaccgctgtctcggcgacg
tccgaatgttatggaggagagaaacaggtataccccagagggagcaggggacagcgaaaa
gagcaggtcgggacaggctttgcttctttggaccaggtgacgacatctgttgaatcaccc
agagaatcaacggttaaaatgagcaaatctacccaggagacagtcagcgaggaaatgagc
aacgaaaaggcaaaacagggaaagagcatgaaagaggaaagcgcaaagactgacagttgt
tctgataactccgacagcgaattgaaagatgattttacactggaaaatgctccaggaaac
tggttaaaagccacaagtggacggaagaagagatgcccgtacacaaagcaccagacgctc
gagctggaaaaggaatttttgtataacatgtacctgtctcgcgagcgccgcctggagatc
agtaagagtatcgatctgaccgatagacaagtcaagatctggttccagaaccgaaggatg
aaactcaagaaactcaataaggaatgtcgtggacgggatcatatggcagtccacaacttc
acttaa
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