Oncorhynchus nerka (sockeye salmon): 115102545
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Entry
115102545 CDS
T07952
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1-like isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115102545
04131 Membrane trafficking [BR:
one04131
]
115102545
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
115102545
Membrane trafficking [BR:
one04131
]
Autophagy
ER-phagy
ER-phagy recepters
115102545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
TPR_MLP1_2
DUF1798
Motif
Other DBs
NCBI-GeneID:
115102545
NCBI-ProteinID:
XP_029478475
LinkDB
All DBs
Position
LG20:24607456..24619715
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AA seq
619 aa
AA seq
DB search
MEKAWRVEFRNVGSSYFPQSRVECHYSISSQHTWASHDWVGLFKVGWLSVKDYHTFVWAL
APEGYQEGTDVNCCVNFQASYLPKSSSQQYQFVYVDGKGEVCSASSQFTFSAPKPLEDLV
TLEEGAHGEEGGTDMLLVVPRAELLQSRLQECLRERAELLHARESAERMKEREREKYRRA
REAWDRGCEELERNIADLKEELRESRDRVEEMERRQEEVEASGEALAQEKSSILTMKAAS
EQRIRELEDDIKALALKALERETELERMKERAKKQAVQRREEEKERKVLQLKLEQSEGEL
RSLSAEFQGLRSSLAQRDTHALQLRDTITTLTYRLSTAQRKEAESEAALAEMRGLRERLG
ASERCAEGLKGELCALVAQRDQGQTELHQARLQAAQLTLQLADASLALREARAHWAQERQ
SLQCSTEKARERLEKLNGETQRIEKKLQEERMEREKVEVELGREKDCNRVQLGETCRELQ
ELKASLRVAQKEKEQLLLEQQDLMEYMGQVEQRREALADAKWSAAVFASTSSMTVFCLTL
RMRTLRPCSPPANPAGSPPPPPAPLPTTACVTPRPSLTPCSPPPPLPPPETCPGPCPEGA
SSSASPLPCCCPGNRAETP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcttggagggtggagtttaggaacgtgggtagtagctacttccctcagagc
cgcgtggaatgccactacagcatcagctcgcaacatacctgggccagccatgactgggtc
gggctcttcaaggtgggatggttgtcagtgaaggactaccacacctttgtttgggccctg
gccccggaaggctaccaggagggcacagatgtcaactgctgtgttaacttccaggcctcc
tatctgcccaagtccagttcccagcagtaccagtttgtgtacgtggatgggaagggagag
gtgtgctctgccagctcccagtttaccttcagcgcccctaaacctttggaggacctggtc
accctggaggaaggagcccacggagaggagggggggaccgacatgcttctggtcgtaccc
agggccgagctactgcagagtcgcctgcaagagtgtcttcgggagcgagccgagctgctc
catgcacgggagtcagccgagaggatgaaggagagagagagggagaagtacaggagggca
agagaggcgtgggacagaggctgtgaggagctggagaggaacatcgcagacctgaaggaa
gagctgcgagaaagcagagacagggtggaagagatggagaggaggcaggaggaggtggag
gcatcaggagaggccttggctcaagagaagagctccatactgactatgaaagcagccagc
gaacagcgaatcagagagctggaggatgacattaaagccctggcactgaaggctttggaa
cgagagactgaactggagaggatgaaggagagggccaagaagcaagcagttcaaaggagg
gaggaggagaaagagaggaaagttctgcagctcaagctggagcagtccgagggggagctg
cgcagtctgtctgctgagttccagggtctgaggagctccctggcccagagagacacacac
gccctacagctacgtgacaccatcaccaccctcacatacaggctgagtacggcgcagcgg
aaagaggcggagagcgaggccgccctggctgagatgcggggcctgcgggagcgtctgggg
gccagcgagcgttgtgccgagggcctgaagggagagctgtgtgccctggtggcccagagg
gaccagggccagacagagctgcaccaggccaggctccaagcggcacagctcaccctgcag
ctagccgacgccagcctggccctgagggaggccagagcacactgggcccaggagagacag
agcctgcagtgcagcactgagaaggccagagagcgtctggagaagctgaatggagagacg
cagcggatagagaagaagctccaggaggagaggatggagagagagaaggtggaagtggag
ctgggaagagagaaggactgtaaccgggtgcagctgggtgagacatgcagggagctccag
gagctgaaggccagtctgagggtggcccagaaggagaaggagcagctgctactggagcaa
caggacctgatggagtacatgggtcaggtggaacagaggagggaggctttggcagatgcc
aagtggagcgctgcggtgttcgcctccaccagctccatgacagtcttctgtctgactctg
aggatgagaaccctgaggccctgcagccctcccgccaaccctgcaggcagccccccccct
cctcccgcccccttgcccactacagcctgtgtgacccccaggcccagcctgactccctgc
tcccctccacccccccttcctcccccagagacatgtcccggtccctgtcccgagggggcg
tcgtcatcagccagcccgctcccctgttgttgcccaggcaatcgggcggagacaccctaa
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