Oncorhynchus nerka (sockeye salmon): 115102577
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Entry
115102577 CDS
T07952
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00512
Mucin type O-glycan biosynthesis
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
115102577
00514 Other types of O-glycan biosynthesis
115102577
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115102577
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
115102577
Glycosyltransferases [BR:
one01003
]
Glycan extension
Type 3 chain
115102577
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
115102577
NCBI-ProteinID:
XP_029478534
LinkDB
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Position
LG20:25505280..25512732
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AA seq
406 aa
AA seq
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MKGLSASRFCFYLGFVVGTLSLYLFLRQLWFERSMELPVLGGVQGSSVAAVAEERQASVE
RAALINLNVPHHTGEDSRVADELYRKVRILCWVMTGPSNLQTKARHVKATWSRHCNVVVF
MSSVDDPDFPTVGLGTGEGRDQLYWKTIRAFHYALEHHGNEADWFLKADDDTFVVVDNLR
WVLSNHTPEEPLYFGKRFKPYAKQGYMSGGAGYVLSKEALRRFVEGFKTKVCTHTTSVED
LALGQCLEKMGVLAMDSRDTWQRETFHPFVPEHHLTGKFSKSFWYWNYCYYPIVEGPQCC
SDLAVSFHYVDAELMYTLEYWTYHLRAYGYRYRYRPPLPQGLVEQLAQPERATVGAAGRG
TIPAGIIVVGGGDQSEMEAVSYKGAARESKIPMDNNRTAVTQERQQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtctgagtgcctccaggttctgcttctacctgggtttcgtagtggggaccctc
agcctgtacctcttcctgcgccagctatggtttgagaggagcatggagctccctgtgctg
ggaggggtccagggcagctcagtagcagcggtggcagaggagaggcaggccagtgtggag
agagcagccctcatcaatctcaacgtcccgcaccacacaggtgaggacagtcgcgtggca
gatgagttgtaccggaaggtgcgcatcctgtgctgggtgatgacaggccccagtaacctg
cagaccaaggcccgccatgtcaaggccacctggagccgccactgcaacgtggtggtcttc
atgagctctgtcgacgacccagacttccccaccgtagggctggggacaggggagggccgc
gaccagctctactggaagaccatccgggccttccactatgccctggagcatcatgggaac
gaagccgactggttcctcaaggcggatgacgacaccttcgtagtggtggacaacctccgc
tgggtcctgtccaatcacacgcccgaggagcccctctacttcggcaagcgcttcaagccc
tacgccaagcaggggtacatgagtggcggagcggggtatgtgttgagtaaggaggccctc
aggaggttcgtggaggggttcaagaccaaggtgtgtacccataccacctctgtggaggac
ttggctctgggacagtgtctggagaagatgggggttctggccatggactccagggataca
tggcagcgggagacgtttcatccattcgtgccagaacaccacctgactgggaagttctcc
aagagcttctggtactggaactactgctactaccccatcgtagagggtccccagtgctgc
tcagacctggcagtatccttccactatgtggacgcagagctgatgtacacgttggagtac
tggacctaccacctccgtgcctacggctacagataccgctacagacctccactaccccag
ggcctggtggagcagctggcccagccggaaagggccactgtgggggcagctggtagaggg
acaataccagctggtattattgttgttggtggtggagaccagtccgaaatggaggcagtg
tcatataaaggggctgcgagggaaagtaaaatccccatggacaataacaggactgcagtc
acacaggagagacagcagtga
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