Oncorhynchus nerka (sockeye salmon): 115102599
Help
Entry
115102599 CDS
T07952
Symbol
ski
Name
(RefSeq) ski oncogene
KO
K26503
Ski oncogene
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115102599 (ski)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
NusG
Motif
Other DBs
NCBI-GeneID:
115102599
NCBI-ProteinID:
XP_029478570
LinkDB
All DBs
Position
LG20:26963075..27040905
Genome browser
AA seq
731 aa
AA seq
DB search
METVTRQSFQPHPGLQQTLKQFHLSSMSSLGGPAAFSARWPHDLLFKKDGKEPEPVLHLP
MQPPTVMPGPLFIPSDRSTERCETVLETETVSCFVVGGEKRLCLPQILNTVLRDFSLQQI
NSVCDDLHIYCSRCTAEQLEILKVMGILPFSAPSCGLITKTDAERLCNALIYGGTYPPHC
KKEFSGSLELEITERSFKIYHECFGKCKGLFVPELYTSPNAACIQCMDCRLMYPTHKFVV
HSHKSLENRTCHWGFDSANWRAYVLLGQDYTGKDEKARLEQHLDEIKEKFDFANKYKRKA
SRASDPIPAKKSKHEDFPSLPLSAEKEKQPDWLRSLSASDNTGLNCIQPRQRPSAFRPWS
PNLSAGDKETPNRPLAALRDSFYNFKTMESAVAPNVALTPLPPAKAGPLSPSVPSTFHPS
AREAPGEGAISRPRKRMATGEIPHPGPEPLCPPSAAASKPPQEDSEVEIEVESREEFTSS
LSSLSSPSFTSSSSAKDLSSPGAQGPVCTLTSAVLTPEGGPFTGVAAAAVAVVLAPDVPG
AGGLESELETLRQALDSGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFL
RVAKKEKLREATEAKRNLRKEIERLRAESEKKMKEANESRMRLKRELEQARQLRVCDKGC
EAGRLRAKYSAQIEDLQMKLQHAEADREQLRADLMLEREAREHLERVVKELQQQLWPKEQ
DKTTKDTPANN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagactgtaactcgacaaagcttccaacctcacccaggactgcaacaaactctcaag
cagtttcatctgagttctatgagctccctcggcggaccggcggctttttctgctcgatgg
ccacatgacctcctgttcaagaaggatgggaaagagcccgagcccgtgctgcatctgccc
atgcagccaccgacagtgatgccggggcctctcttcatcccgtccgaccgctccactgag
aggtgcgagacggtcttggagacggagactgtctcctgtttcgtggtcggcggcgagaaa
cgcctgtgcttgccgcagatccttaacaccgtccttcgggatttctccctccagcagatc
aactcggtgtgcgacgacctccacatctactgctccaggtgcaccgcggaacagctggaa
atcctcaaagtcatggggattcttccattctccgcgccttcctgcggactcataaccaaa
actgacgcggagcgcctgtgcaatgccctgatttacgggggcacctaccctccgcactgc
aagaaagagttttctggctccctggagctggagatcacggagagaagcttcaaaatatac
cacgagtgtttcggaaagtgcaagggtctcttcgtcccggagctgtacaccagccccaac
gcagcctgcatccagtgcatggactgcagactcatgtacccgacccataaattcgtggtg
cacagtcacaaatcgttggaaaacaggacttgccactggggctttgactccgccaactgg
agggcatacgtcctcttgggccaggattacacggggaaagatgagaaggcgcgcctggag
cagcatttggacgagattaaagagaaatttgacttcgccaacaaatataagaggaaagca
tcaagggcatcagatcccatcccagccaagaagtctaaacatgaagacttcccatcgctg
cccctgtccgctgagaaagagaagcaacccgattggttaagatccctctcggcttcagac
aatacggggctcaactgcatccagcccagacagagaccctcggctttcaggccctggtcc
cctaacctctcggctggggacaaagagacgcccaaccgccctctggctgcactgagagac
agcttctacaacttcaagacgatggagagtgccgtggcaccaaacgttgccctcacaccc
ctccccccggcaaaggcggggccgctgtccccgtccgtgcccagcaccttccaccccagc
gccagggaggccccaggagaaggggccatctccaggccccggaagaggatggccaccggg
gagatcccgcacccaggccctgagcccctctgccccccatcagcagcagccagcaagccc
ccacaggaggactcagaggttgagattgaggtggagagccgagaggaattcacttcgtcc
ctttcctccctctcctccccatccttcacctcctccagctcggctaaggacctgagctcg
cctggcgcacagggcccagtgtgtacattgacgtcggctgtattgaccccagagggtggc
cctttcactggggtagcagcagcagcagtggcagtggtgttggcccccgatgtacccggg
gccgggggtcttgagtcggagctggagaccctgaggcaggcgctggacagcgggctggac
tccaaggagtctaaggagaagttcctgcatgagatcgtcaagatgagggtgaagcaggag
gaaaagcttggctcagctctgcaggccaaacgcagcctccaacaggagttggagttcctg
cgggtggctaagaaagagaagctcagggaggccacggaggccaagcggaacctgaggaag
gagattgagcgcttgcgtgctgagagcgagaagaagatgaaggaggctaatgagtcacgc
atgcgtctgaagagggagctggagcaggcccggcagctccgagtgtgtgacaagggttgc
gaggcgggccgcctgcgcgccaagtactcggcacagatcgaggacttgcaaatgaagctc
cagcatgccgaggcagaccgcgagcagctccgggcagacctaatgctggaacgggaggcc
agggagcacctggagagagtggttaaggagctgcagcagcagctgtggcccaaggagcag
gacaagacaaccaaggatacccccgccaacaactag
Oncorhynchus nerka (sockeye salmon): 115125651
Help
Entry
115125651 CDS
T07952
Name
(RefSeq) ski oncogene-like
KO
K26503
Ski oncogene
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115125651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
PUMA
NusG
Motif
Other DBs
NCBI-GeneID:
115125651
NCBI-ProteinID:
XP_029511043
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
METVTRQSFQPHPGLQQTLKQFHLSSMISLGGPAAFSARWPHDLLFKKDGKEPEPVLHLP
MQPPTVMPGPLFIPSDRSTERCETVLETETVSCFVVGGEKRLCLPQILNTVLRDFSLQQI
NSVCDDLHIYCSRCTAEQLEILKVMGILPFSAPSCGLITKTDAERLCNALIYGGTYPPHC
KKEFTGSLELEFTEKSLKIYHECFGKCKGLFVPELYTSPNAACIQCMYCRLMYPTHKFVV
HSHKSLENRTCHWGFDSANWRAYILLDQDYTGKEEKARLEQHLDEIKEKFDFANKYKRKA
SRVS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagactgtaactcgacaaagcttccaacctcacccaggactgcaacaaactctcaag
cagtttcatctgagttctatgatctccctcggcggaccggcggcgttttctgctcgatgg
ccacatgacctcctgttcaagaaggatgggaaagagcccgagcccgtgctgcatcttcca
atgcagccgccgacagtgatgccgggaccactcttcatcccctcggaccgctccactgag
aggtgcgagacggtcctggagaccgagactgtctcctgtttcgtggtcggcggcgagaaa
cggctgtgcctgccgcagatcctcaacaccgtactgcgggatttctcccttcaacagatc
aactcggtgtgcgacgacctccacatctactgctccaggtgcacggcagaacagctggag
atcctcaaagtcatgggaattctccccttctcggcgccttcctgcggactcatcaccaaa
acggatgcggagcgcctgtgcaatgccctgatttacggaggtacctacccgccgcactgc
aagaaagagttcacgggctcactggagctggagtttacggagaaaagcctcaaaatatac
cacgagtgtttcggaaagtgcaagggtctcttcgtcccggagctgtacaccagccccaac
gcagcctgcatccagtgcatgtactgcagactcatgtacccgacccataagttcgtggtg
cacagtcacaaatcgttggaaaacaggacttgccactggggcttcgactccgccaactgg
agggcatacatcctcttggaccaggattacacagggaaagaggagaaggcgcgcctggag
cagcatttggacgagattaaagagaaatttgatttcgccaacaaatataagaggaaagca
tccagggtgagttga
Oncorhynchus nerka (sockeye salmon): 115136642
Help
Entry
115136642 CDS
T07952
Name
(RefSeq) ski oncogene-like
KO
K26503
Ski oncogene
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115136642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
DUF4407
Motif
Other DBs
NCBI-GeneID:
115136642
NCBI-ProteinID:
XP_029528094
LinkDB
All DBs
Position
LG2:complement(25177227..25215775)
Genome browser
AA seq
678 aa
AA seq
DB search
MEAPSSFQPHPGLQQTLKQFHLSSMSSLGGPAAFSARWHQEILFNKDGKTAELMLAMPVQ
TPPVMSGPLFIPSDHTTERSETVLEREPISCFVVGGEKRLCLPQILNSVLRDFSLQQINS
VCDDLHIYCSRCTADQLEILKVVGILPFSAPSCGLITQTDAERLCNALVYSGSYLPHCNK
ELSGSMELERTEKSFKIYHECFGRCKGLFVPELYTSPNAACIQCMDCRLMYPTHKFVVHS
HKRLENRTVHWGFDSANWRAYVLLDPDYTGKEEKALLEQHLKVIKGKFDFVNKPSNKSCR
PYSPVPAKKFKLEKIHSPSADKEKRPDWLQSLSKSGNKDLKPVQLKQRPSAFRPWSPRST
SAERSNHKNVDTSVVPNVAPAPLANQREEQAPVGHSQAPGRGDQHISSGPASQCGDSQPG
PRLVHINTNTGNGVEEMETDGEIEVDDCDDYLPSVPSLASLPSACSSMSWTLTPQTTMRP
LEGPARLVLPGAPSCPELDTLRQTLYGGLDSKEAREKFLQEIVKMRVKQEEKLGAALQAK
RSLQQELDFVRVSKKGRLREAIEAKRNLRKEIERLSMEWDRKMREADESRGHLKRELERE
RQTRVCDKGCEAERLRAKYSTQIEELQVQLQQAEVDREQLREELQQEREARQSLERVVKD
LQAQLGDRQDNARKPPTH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggccccgtcaagctttcagcctcatcccggacttcagcaaactctgaagcagttt
catttgagttctatgagctctcttggtggaccggcggcgttctccgctcggtggcaccag
gaaattctgttcaacaaagatggaaaaacagctgaactgatgctggccatgcctgtccag
acaccaccggttatgtcggggccgttattcattccatccgaccacaccaccgaaaggtcc
gaaactgtcctggagcgtgagccaatttcgtgtttcgtggtaggcggcgaaaaacgtctg
tgtctgccgcagattctcaacagtgtcctgcgggatttctcgcttcagcagatcaactcc
gtgtgcgacgacctgcacatctactgctcccggtgcaccgcggaccagctggagatcctc
aaagtagtgggtatcctacccttctctgccccatcatgcggactgatcacccagacggat
gctgagcgcctctgcaatgccctcgtttacagtggttcctatcttcctcactgcaacaag
gagctgtctggctccatggagttggagaggacggaaaaaagtttcaaaatataccacgaa
tgttttggtaggtgtaaggggttatttgtcccagaactgtataccagtcccaatgccgcc
tgtatccaatgcatggactgcagactaatgtaccccactcacaagtttgtggtccatagt
cacaaaagactagagaaccggacagttcactgggggttcgactcagctaactggcgtgcc
tatgttctcctggacccggactatacagggaaagaagagaaagctctcctggagcagcac
ctcaaagtaatcaaaggcaaatttgacttcgtaaacaagccctcaaacaaatcatgcagg
ccgtacagcccagttccagccaagaagttcaaactggagaaaatacactctccatctgct
gacaaagagaagcgacccgattggctacaatctctatcaaagtcagggaacaaggatctg
aaaccggtccagctgaaacagaggccgtcagccttccgcccctggtcccccagaagtaca
tctgccgagagatcaaaccacaaaaatgtggacacgtctgtggtgcccaatgtggcccca
gctccgttggccaaccagagagaggagcaggccccagtgggccacagccaggctccagga
aggggagaccagcacatcagctccggaccagcatcacagtgtggagactcacagcctggg
cccagacttgttcacatcaacaccaacacaggcaacggtgtggaggaaatggagactgac
ggggagattgaggtggatgactgtgatgactacctaccatcggtcccctccttggcatcc
ctcccatctgcctgctccagtatgtcctggaccctgaccccccagaccacaatgaggccc
ctggagggcccagcccggctggtattaccaggggcaccttcatgcccagagctggacaca
ctgagacagaccctgtatggaggtcttgactccaaggaggccagggagaagttcctgcag
gagattgttaagatgagagtgaagcaggaggagaagctgggggcagcgctgcaggccaaa
cgcagccttcagcaggagttggattttgtgagggtgtccaagaaagggcgtcttcgagag
gccatcgaggccaagcgcaacctgaggaaagagatagaacgcctgagcatggagtgggac
aggaagatgagggaggcggacgagtcccgtggccatctgaaaagagagctggagagagag
agacagacacgagtctgcgacaaaggctgtgaggctgaacgcctgcgagccaagtactcc
acacagattgaggagctgcaggttcagctgcagcaggcggaggtggaccgagagcagctg
agagaggagctacagcaggagagggaggcgcggcagagcctggagagggtggtcaaggac
ctgcaggctcagctgggagaccgacaggacaacgccaggaaacccccaacacactaa
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integrated database retrieval system