Oncorhynchus nerka (sockeye salmon): 115102652
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Entry
115102652 CDS
T07952
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-2 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115102652
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115102652
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115102652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf-CCCH_4
zf_CCCH_4
zf-RING_2
zf-C3HC4
zf-CCCH_2
zf-UDP
zf-CCCH_DUS3L
zf-RING_5
zf-C3HC4_4
zf-RING_UBOX
zf-CCCH_PARP12
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
115102652
NCBI-ProteinID:
XP_029478668
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All DBs
Position
LG20:complement(30273286..30279023)
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AA seq
420 aa
AA seq
DB search
MEQYGFPYHDSYERPSINRRICRQFLNGSCRFGSRCHYLHELPSVLPPTSQICRYFQKGG
CWFGDGCRYLHVTAPEAASAGLSRRGSAPVVHTPWVGHALPERRGSEPSLLQAQGFYSQG
RRGAESMQTYVAHLQHNFGRQNTDITEEDVAEGSSQTSPHRRAESSHAHVPEPQASVQQC
PETSAQTTVPSSTLSAQAGEWRPLVNQQQEPSSLEVAAEHGASSATAAFQTAQENTESFN
QSKDVTCGICMETVYEKTSAEDRRFGILPNCSHPFCLSCIVTWRKTKNFHEEVIKSCPQC
RVKSAFYVPNKYWVEGQPKETLIRNFKAKCSKRRCSFFMRHGCCPFKTECLYWHDLPHGY
RPPRRRRSAHSHHAMSLDDLGSLQLLDYVIAMTLLDDLLDDEDDDEFPLYLSEYDDYDLF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatatgggtttccgtaccatgactcttatgaacgtccttcaattaatagaagg
atttgcaggcaattcttgaacggttcatgcagattcggttcgcgctgtcattatctacac
gagttgccatcagtgttgccgccgacatcccaaatatgcaggtacttccagaaaggtgga
tgctggtttggagatggctgcagatatctccacgtcactgctcctgaggcagccagcgcg
ggtttgagtaggaggggttcagcacctgtggttcacaccccgtgggttggccatgcacta
ccagaacgtagaggatcagagccatctctactgcaggcacagggcttctacagccaagga
cgtcggggcgcagagtccatgcagacctatgtagcacacctccagcacaactttggccgc
cagaacactgatatcacagaagaggatgtagccgaaggttcatcgcaaacttcaccgcac
cgaagggcggagtcatcacatgctcatgtcccagagccccaagcttcagtccaacagtgt
cctgagacatcggcccaaactacagttccatccagcacactgtcggctcaagcaggcgaa
tggaggcctctagtcaatcagcagcaggagccttcctccctggaggtagcagcagagcat
ggtgcctcctctgccactgctgccttccagacggcccaggagaatacggaatccttcaac
caaagtaaagatgtgacctgtggcatctgcatggagactgtgtacgagaagaccagtgct
gaggataggcgctttggcatcctgcccaactgcagccatcctttctgcctgagctgcatt
gtcacctggaggaaaactaaaaacttccatgaagaagttataaagagctgcccacagtgc
agagtgaagtccgcgttttacgtccctaacaagtactgggtggagggacaaccaaaggaa
acccttatccgtaacttcaaagcgaaatgcagtaaaagaagatgtagtttcttcatgcgt
catggatgctgtcccttcaagactgagtgtctctattggcatgacctgcctcatggctac
cgaccacctcgccgacgcagatcagcacattctcaccatgcgatgagtctggatgacttg
ggcagcctacaacttcttgactatgtcattgctatgactctgctggatgacttgctggat
gatgaggatgacgatgagtttcccttgtacctgagtgaatatgacgattatgacctattc
tga
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integrated database retrieval system
