Oncorhynchus nerka (sockeye salmon): 115102705
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Entry
115102705 CDS
T07952
Name
(RefSeq) nuclease-sensitive element-binding protein 1-like isoform X1
KO
K09276
Y-box-binding protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102705
03019 Messenger RNA biogenesis [BR:
one03019
]
115102705
03041 Spliceosome [BR:
one03041
]
115102705
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
115102705
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115102705
mRNA cycle factors
Common to processing body (P body) and stress granule
115102705
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
General mRNP proteins
115102705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
115102705
NCBI-ProteinID:
XP_029478789
LinkDB
All DBs
Position
LG20:complement(33033535..33042806)
Genome browser
AA seq
327 aa
AA seq
DB search
MSSEAETQPPEPAVVDAESPSSPAAAAVSAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKDDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVVEGEKGAEAANVTGPAGVPVQGSKYA
ADRNRYRRYPRRRGPARDGEYPDNYQSDGEGEGDRPPRKSREGAESAPEGEMQTQQRRPS
FPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPMRQNYYRGFRP
RFRPSRGGGPPRPRPVRDGEGENKENNQGGDGENQEPRQRRYRRNFNYRRRRPQTGGKPQ
DSKEAKADGEPSLEKTSAPAAAQGGAE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaaccgccggagcctgctgtcgtcgacgcggagagccca
tccagcccggcggcagccgccgtttccgcgggtgataagaaggtcatcgcaactaaggtc
ttgggtacagtcaaatggttcaacgtcagaaatggctacggtttcatcaacaggaatgac
acaaaagatgacgtctttgtccaccagactgccataaagaaaaacaacccgaggaaatac
cttcgcagtgttggagatggagaaattgtggagtttgatgtggttgaaggggagaaggga
gcagaggcagccaatgtcaccggcccagcgggtgtcccagtccaggggagcaagtatgcc
gctgaccggaaccgctataggcggtacccccgcaggaggggccctgcccgtgacggcgaa
tacccagacaactaccagagcgacggtgagggcgaaggagatcggcccccccgcaagagc
cgtgagggcgccgagagtgccccagagggagagatgcagacccagcagcgcaggccctcc
ttccctgggagacggcgctaccccccatactttgtacgtagacgctacggccgtcggccc
ccgtacaccaacgcacctcgcggagagatgactgagggtggagaaggcgacgagaaccag
ggcggtccagaccagggcaacaaaccaatgaggcagaactactacagaggcttccgacca
aggttcagaccaagcagaggtggtggtccaccccgtcccagaccggtacgggacggcgag
ggggaaaacaaggagaacaaccagggtggtgacggcgagaaccaggagccccgccagcgc
cgctaccgccgaaacttcaactaccgccgcagacgcccacagaccggtggcaagccccag
gatagcaaggaggccaaggccgacggcgaaccatcccttgagaaaacgtccgctcccgca
gccgcgcagggcggggctgagtag
DBGET
integrated database retrieval system
