KEGG   Oncorhynchus nerka (sockeye salmon): 115102706
Entry
115102706         CDS       T07952                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10-like isoform X1
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115102706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115102706
   03036 Chromosome and associated proteins [BR:one03036]
    115102706
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115102706
   Coactivators
    SAGA/TFTC/STAGA complex
     115102706
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115102706
    STAGA complex
     115102706
    TFTC complex
     115102706
    SAGA complex
     115102706
    SLIK complex
     115102706
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 115102706
NCBI-ProteinID: XP_029478794
LinkDB
Position
LG20:complement(33131469..33133505)
AA seq 185 aa
MNVDTPQPVMTGGSSNSSTSNNCLTNNNAAINVSSIPSVAISNSPTTAAMATPSGTSVSN
GVYVPSGIANGDVKPVITTTPLADFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRL
VSLAAQKFISDIANDALQHCKMKGTASGSSRNKTKQDKKYTLTMEDLSPALSEYGINVKK
PHYFT
NT seq 558 nt   +upstreamnt  +downstreamnt
atgaacgttgatactccacagccagtcatgacagggggctcttcaaattcctcgacatcc
aataattgcctcactaacaacaatgcagcaattaacgtcagcagcataccctcggttgcc
ataagtaattccccaaccaccgctgccatggccacaccatctggcacatccgtgtccaac
ggcgtgtatgtgcctagtggcattgccaacggcgacgtgaagcctgtaatcacaaccaca
ccactagctgactttcttatgcaattggaggactacactcctacaatccctgatgcagtg
acaggctactatctcaaccgggccggctttgaggcatctgatccgcgaataatccgtcta
gtctccctcgcggctcagaagttcatctcagacattgctaacgatgccctgcagcactgt
aaaatgaagggaactgcctcggggagctccaggaacaagacaaagcaggacaagaagtac
acactgaccatggaggacctctcccctgccctttctgagtatggcatcaacgtaaagaaa
cctcattacttcacatag

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