Oncorhynchus nerka (sockeye salmon): 115102711
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Entry
115102711 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102711
04121 Ubiquitin system [BR:
one04121
]
115102711
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115102711
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115102711
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115102711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
Zn_ribbon_19
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
DUF8608
zf-Nse
FAR1_N
zf-RING_16
HypA
Motif
Other DBs
NCBI-GeneID:
115102711
NCBI-ProteinID:
XP_029478801
LinkDB
All DBs
Position
LG20:33347746..33352358
Genome browser
AA seq
345 aa
AA seq
DB search
MAEAPLRPCRFFCHQCSAEIDPRLPDYTCPQCESGFIEELSEERSTENESTSIASTSDQN
RPTFEIMDHQHMFTFPPGYGQFSLGIFDENFDLRTGMPTEDNRETENRREREMASRQRYS
ARQPRGRHIPRRQGQRHEGVPTLEGIIQQLVNGIIAPTAMAPNIGMGPWYVLLYKYPHTL
CCVCEHTSCFVFLVISWNILDRGMLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADR
ERIKTLPTIQITEEHVGSSLECPVCKEDYSVGETVRQLPCNHLFHNDCIVPWLEQHDTCP
VCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSSNSPSNENAANNS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccctacggccctgtcgttttttttgtcaccaatgttcagcagagatc
gaccctcgtctcccggactacacctgtccacagtgtgaatctggcttcattgaagagcta
tcagaggaaagaagcactgaaaatgagtccacatccattgcctccaccagcgatcagaac
cgtccgactttcgagattatggaccaccagcacatgtttacatttccgcccggatacgga
cagttttctctggggatctttgatgagaattttgacctccgaacggggatgccgacggaa
gacaaccgcgagacggagaaccggcgggaacgggagatggcatcacggcaacggtacagt
gcccggcaaccacggggacgacacatcccacggcgacagggacagagacacgagggagta
cccactttagagggaatcatccagcagctagtaaatggaatcatagcacccacagccatg
gctccaaacattggaatgggaccatggtatgtgttattatataaataccctcatactcta
tgttgtgtctgtgaacatactagttgctttgtgtttctagtaatttcttggaatattctt
gataggggcatgctacactcaaatccaatggactatgcttggggtgccaatggacttgat
gctatcattacccagttattgaatcagtttgagaacacgggtcctcctcctgctgacaga
gagaggataaagaccctgcccaccatccagatcacagaggaacatgtgggttccagttta
gaatgtcctgtgtgcaaagaagactacagtgtcggggagactgtcaggcaacttccgtgc
aatcacctgtttcacaatgactgtatagtaccatggctggaacaacacgacacatgtcca
gtgtgcagaaagagtctcagtggacagaacacagctacagaccccccgggactatcagga
atgaacttctccccttcctcctcctcttcatcctcctccaactcccccagtaacgagaac
gctgccaacaactcctag
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