Oncorhynchus nerka (sockeye salmon): 115102729
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Entry
115102729 CDS
T07952
Name
(RefSeq) semaphorin-6B-like
KO
K06842
semaphorin 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115102729
NCBI-ProteinID:
XP_029478830
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All DBs
Position
LG20:complement(34268503..34330802)
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AA seq
903 aa
AA seq
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MTTMAPPLMFLLLLLQLAHSSFPEEPGPLSYAPLEVVRRYPVFVGRAHRSSQRQELHIHT
VLQVNRTLYIGARDDLYRVELDNMSGDEIFYSKKRTWESNKNDIRVCRMKGKHEGECRNF
IKVLLSQHGELFVCGTNAFNPLCANYTRDTLEMVGETVSGMARCPYDPRHANVALFAEGS
LFTGTVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPFFVSAVEWGPHIYFFFREMAM
EFHHLEKVMVSRVARVCKGDQGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLHATSP
ILNMNGRDVILGLFSTPPNSIPGSAVCVFDMQQLARVFEGRFKEQKSPESIWTPVSDELV
PKPRPGGCAVQGSQFSSSKTLPDEVLNFVKTHPLMDETIPLVGHRPWVVKTMGRYQLTAM
VVDTEAGPHRNRTVLFLGSTRGTVLKFLIVPSGDNSPTHSSVFLEEVEGFNPEKCGEDSV
QARQLLSLSLDRPSHTLLLAFPSCLVRLPTARCHLHSRCMKSCLTSRDPYCGWTRGSTCS
FLRPGTRLPFQQDIEYGNFSHLGDCGGVIQQSLLVEPESLVSLNLLVASAISAFTIGAML
SGLAVCWIMAHKPSNRRHASNSSQSSIQRQERGMLTSGGGMGGSVLSVTRQGGGDRPCSQ
GGETLFVMPNGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSGSGGWDNSQTYLGGSTMG
LASPCPLPCPPHPSTAVYLTTRLFQGGGGGRHVGEERGREGETPRQHYVCLSKPWGEKGR
SGTPKSALRKSAGEYVYPMTPQDSPNRRRVVSAPSAHMEFGEPLPLRWPPQEGYILSSQG
MVPAPPSSMPTPNGQQYVAQHHTPGPGRAQLRGELGRGEMGELVDLSQLLSKKSSNERTH
NGQ
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatggcccctcccctcatgtttctcctcctgctccttcaattggctcacagc
tctttcccagaggagcccggtcctctaagctatgctcccttagaggtggtgaggaggtat
cctgtgtttgtgggtagagctcatcgttcctcacagagacaggagctgcacattcacaca
gtgctccaggtgaaccgcacactctacataggagccagagatgatctatatagagtggag
ctggacaatatgtcaggggacgaaatattctacagcaagaagcggacgtgggaatccaat
aagaatgacattcgagtctgtaggatgaagggaaaacatgagggggagtgtcgtaacttc
atcaaggtgttattgagccaacatggagaactgtttgtgtgtggaactaacgccttcaac
cctctatgtgcgaactacactagggacactctggagatggtaggagagacggtcagtggg
atggctcgatgcccttatgatcccagacacgctaacgtggctctttttgcagagggcagt
ctcttcactggtactgtaacagactttctggcgattgatgctgtgatctatcgtagccta
ggcgacagccctgctctccgcaccgtcaaacacgactccaagtggtttagagagcccttc
tttgtgagcgcagtcgagtgggggcctcatatttacttcttcttcagggaaatggccatg
gagttccatcacctggagaaggtgatggtgtctcgtgtggcgagggtgtgtaagggggac
cagggtgggtctcagagggtgttggaaaaacagtggacatcgttcctgaaggccagactg
aactgctctgtcccaggagactcccacttctacttcaacctgctccacgccaccagcccc
atactcaacatgaacggcagggacgtcatactgggactgttctctacaccgcccaacagt
atccctgggtctgcagtctgtgtgtttgacatgcagcagttggctagggtgtttgaggga
agattcaaggagcagaaatctccagaatccatctggacacctgtatctgatgagctcgtg
cccaaacccaggccgggtggctgtgcggtgcaggggtctcagttcagctcgtctaaaact
ctgccagatgaggtgttgaactttgtgaagactcatcccctgatggatgagaccataccc
ctggtggggcacagaccctgggttgtcaagactatgggcaggtaccagttgacagccatg
gtggtggacacagaagctggtccccatagaaaccgtacagtattgtttctgggctccacg
cgagggaccgtcctcaaattcctcattgtcccgagtggagacaactctcccacacacagc
agtgtgtttctggaggaggtggagggcttcaaccctgagaagtgtggagaggactctgtc
caggccagacagttgttgtctctgtctttggatcgtcccagtcacactctactgctggcc
ttcccttcctgtctggtcagactacccacagcacgctgccacttacactcacgctgcatg
aagagctgtctgacttccagagatccctactgtggctggaccagaggcagcacctgctcc
ttcctcagaccaggcacacggctgccttttcagcaagacattgagtatggcaacttctcc
catcttggagactgtggtggtgtaatacagcagagtctgctggtcgagccggagagtctc
gtctccctcaacctgctggtggcgtctgcaatctcggccttcaccatcggggcgatgcta
tcaggccttgccgtctgctggatcatggcccacaagcccagcaaccgacgccacgctagc
aactccagccagtccagcatccagcgccaggagagggggatgttgacgtcaggaggaggg
atgggaggatcggtccttagtgtgacccgtcagggaggaggggatagaccttgttctcag
ggcggggagaccctgtttgtgatgcccaacggttgggtgaagtcaggggagctggaccca
gggttcttgcccacgccagagcacacgccccagcagaagagacgcgggctcaggctttcc
gattctggatcaggggggtgggacaacagccagacctacctgggagggagcaccatgggg
ctagcatccccctgccctctcccttgccccccacacccctccactgctgtctacctgacc
accagactcttccagggtggaggaggtgggagacatgtgggtgaggagcgaggaagagaa
ggggagacgcctcgccagcactacgtgtgcctcagcaagccctggggggagaaggggagg
agtgggaccccaaagtcggcacttcgcaagtcggcaggggagtacgtgtaccccatgacc
ccccaggactccccgaataggaggagggtggtgtcagcccccagcgcccacatggagttt
ggggagcccctgcctctccgctggcctccccaggaaggctacatcctcagcagccagggc
atggtccccgcacctccatcctccatgccgacccccaacggccagcagtatgtggcccag
caccacacccccgggccgggcagggctcagctgagaggggaactggggagaggagagatg
ggggagctggtggatctcagccagctgctgagtaagaagagttccaatgagaggactcac
aacggccagtga
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