Oncorhynchus nerka (sockeye salmon): 115102775
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Entry
115102775 CDS
T07952
Name
(RefSeq) AP-1 complex subunit gamma-1-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115102775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102775
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Others
AP-1 complex
115102775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
DUF11
Peptidase_M73
Dopey_N
Motif
Other DBs
NCBI-GeneID:
115102775
NCBI-ProteinID:
XP_029478917
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All DBs
Position
LG20:36438773..36450479
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AA seq
790 aa
AA seq
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MSPSVRLQEMIRVIRGARTQGEERGVIQRECAAIRAQFRQADNGTRSHNLAKLLYVHMLG
YPAHFGQMECVRLIASPRYNEKRVGYLGAMMLLDEKQDASLLITNSIKNDLSHSSQYVQS
LALCTLGCMGSAEMCRDLAPEIDRLLRASNSYIKKKAALCAVHIVRKVPELGELFTPASR
SLLSEKNHGVLHGAVVLITELCERNPETLEQFRKAVPELVQIMKGLVMSGYSPEHNVAGI
SDPFLQVRILRLLRILGRNNETASDAVNDLLAQVATNTDSSKTAGSAVLYETVLTVMDIK
SESGLRVLAVNILGRFLLNNDRNIRYISMTSLQKIIQTDHNAVQRHRGTIVDCLKDQDAS
VKRRALELSLALVSAVNIRSLMKELLLFLSSCPPELRAHTTSGIFNAAERYAPSQRWHID
TILHVLTTAGGDVRDETVPNLIQLITTATELHCYTVHKLYRALITDISVQSLVQVACWCI
GEYGDLLLRGECEETEPVQVAEDDVLDALETVLQSHMSSPATRGFALTATMKLSTRITHN
VDRIRSIVSIYGSCIDVELQQRAVEYNALFKKYDHMRAAVLERMPVIDKSSPGHTNGESA
GGSIKEMEPTKRTQEVVLPQEPANQVCDLLDLLGGSGEPPQPSPALSTTALGPVSSTAGG
DLLDLLGGLDVTPVPPSVIVYEKNGVTLKLQTDRQTDTGMTITLTATNSTDREITSLTLQ
AAVPKSVQLQMKAPSGDVIPAHGLGQVTQTVLLNNPNKVSLKMRVRVCYTSQDFVCQDTV
QIDSFPSPAW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtctgtgcgcctgcaggagatgatcagggtgatcagaggagcccgtacacag
ggagaggagcgtggtgtgatccagagggagtgtgctgcaatccgggcgcagttcagacag
gctgacaatgggacgcgctctcacaatctggcaaagctgctgtatgtgcacatgctgggt
taccccgcccacttcggtcagatggagtgtgtgcgtctgattgccagccctcggtacaat
gagaagcgtgttgggtacctgggtgccatgatgcttctagacgagaagcaggatgctagc
cttctcatcactaactccatcaagaatgacctgtcccacagcagtcagtatgtccagtct
ctggctctgtgtactctgggctgtatgggctcagctgagatgtgtcgagacctggcccca
gagatcgaccgcctcctcagagcctctaactcctacatcaaaaagaaggccgctctttgt
gcggtgcacattgtgaggaaagtaccagaactaggagagctgtttacccctgcatctcga
tccctgctctctgaaaagaaccacggggtgttacatggagctgtggttctgatcactgag
ctgtgtgagcgcaacccagaaacactagagcagtttcgcaaggcggtgccggagctggtc
cagataatgaaaggcctggtgatgtctggttactctccagaacacaacgtggctggtatc
agtgaccccttcctacaggtgcgcattcttcggttgctgaggatcctgggtcgtaataac
gaaacagctagtgatgccgtgaatgacctgctggcccaggtggccacgaacacagacagc
agtaagaccgcaggcagtgctgtgttgtatgaaaccgttctcacggtcatggacatcaaa
tcggaaagtggcttgagggtcctagctgtgaacatcctggggcgatttcttctgaacaac
gataggaacatccggtacatctcaatgacttccctacagaagattattcagacggaccac
aatgcagtgcagcgtcacagagggaccatagtggactgcctgaaagaccaggatgcttct
gtcaaacgccgggcactggagctttctctggccctggtgtcagccgtcaacatccgctct
ctgatgaaagagctgctcctcttcctctccagctgtcccccagagctcagagcacacacc
acctcgggcatcttcaacgctgcagagaggtatgctccctctcagcgctggcacattgac
accatcctgcatgtcctcaccacggcagggggcgacgtgagggacgagactgttcccaac
ctgatccagctcatcaccacagcgacagaactccactgctacacggtccacaagctgtac
agagccctgattacagacatctcagtgcaatccctggtacaggtggcatgctggtgtatt
ggggagtatggagacctgcttctgagaggcgagtgtgaggagacagaacctgttcaggtg
gcagaggatgacgtcctggacgccttggaaacggttctacagtcgcatatgtcgtcgccg
gcaaccaggggcttcgctctcacagcgacaatgaaactcagcacacgcataacacacaac
gtggatcgcattaggagcatcgtcagcatctacggcagctgcatcgacgtggaactccag
cagagggcagtggaatacaacgctctgtttaagaaatacgaccacatgagggctgccgtt
ttggagagaatgccagtgattgacaagagctcaccgggacataccaatggagaatcagca
ggggggtctatcaaagagatggagccaaccaaacggacacaggaagtagtattaccccag
gaacctgctaaccaggtgtgtgatctgttggacctgctaggtggttctggggagcctccc
cagcccagccccgccctgtccaccacagcgctaggccctgttagcagcacggctggggga
gacttactggacctgctgggaggcctggacgtcacacctgtgccacctagtgttatagtg
tatgagaagaacggcgtgacactgaaactacagactgacagacagacagacacgggcatg
accattacccttactgccaccaactctactgacagggagatcaccagcctcaccctgcaa
gcagcagtacccaagagtgtccagttacagatgaaggctccgagtggtgacgtcatcccc
gcacatggcttaggtcaggtgacccagactgtgctcctcaacaaccccaacaaggtgagt
ctgaaaatgagggtgcgcgtgtgctacaccagccaggactttgtctgccaggacacggtg
cagatcgactcatttcccagccccgcctggtaa
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