Oncorhynchus nerka (sockeye salmon): 115102783
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Entry
115102783 CDS
T07952
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115102783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115102783
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115102783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
RcpB
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
115102783
NCBI-ProteinID:
XP_029478927
LinkDB
All DBs
Position
LG20:36687875..36712852
Genome browser
AA seq
2570 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPGDAFTQGSSDPVEEALKLALGQIDPPYEPTPALCTPVAS
PIIPDPVPVQQQASVPFALPQTVSIASTVPQTTLSVASNTSRATTVLLGSPLTVNSSAGT
TQQITTQQFTTQQLTQIAQQLTPQQLAAITQQAGGQGGSKIVILKGPGGHAQVLQTVPGT
GSQAGKVTFARVLSGTQLRPGMQILSGGTVLNQASPGQGPVKVGTGIQRLVQSPNGPLKQ
VQLISMPQGQTQTVQMQIPQAQLAQSQQIQLQPQTQVQLQSTMQTQVTATATGTTSVRPQ
GVTLTTVPQQGEAKRITLVLQQPHGGTTQGGAVTVGGSGQLQQGQQQRLVLGNLPGKLVL
QGGQLAALTQARAGQTGAQPKVLTIQLQVQQQPNQQGGPKFQLVSGGQGSSPQVVQISQG
QGGQRLAMPLKLLLQPQMSSTSTAGGTVSVVKVINTSAAGSAPSTTTTMASTGIRLAKAQ
EPVRRVETLGKQEKANRIVAEAIARAKARGERNIPRVLNQDELPPGQKAADKGAAATTTG
TPGAKKKGGGGGSKKKSPPGAGGKGMACAEKKGKAKAAGGAAVGTPVGVAGTSGSKSKSK
AKINTITLVGGKKRKRNASSDHSDGDLSPASPSKALEEDMLAKRRSNRQVKRKKYTEDLD
IKITDDEDEPEEDVDVTTTAAVASITGGAAGQLMGEQLKQELQLDGDGLSSMQFFVENPN
EEDAAIVDKVLSMRLTKKEVSPGHYINAEEFFVKYKNYSYMHCEWATLEQLERDKRIHQK
LKRFKIKHAQMRLLLQEEEEPFNPDYVEVDRILDESNSVDKDNGEPVVYYLVKWCSLPYE
DATWELREDVDEDKVVEFRKIQDRQPQLKRTPRPQAAAWKKLEEFREYKSGNVLREYQLE
GVNWLLFNWYNRQNCILADEMGLGKTIQSISLLSEVLGAGVQGPFLVIAPLSTITNWERE
FATWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFEALITTFEMILSDCPEL
REISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPA
QFSSESEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQ
KKYYRAILERNFSFLSMGATSNSNVPNLLNTMMELRKCCNHPYLITGAEESIVAELREVY
DPMVPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLY
ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQND
LQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESNVNGQ
IQQFSKKEIEDLLRKGAYAAIMDEEDEGSKFCEEDIDQILQRRATTITIESEGKGSTFSK
ASFVATENRTDIALDDPEFWQKWAKRADIDFDSMNRKNTLVIDTPRVRKQTRQFATLRGE
GGEISDPDSDDEYPPANSRQSRSSRRSERQTGNGYGRTDCFRVEKHLLVYGWGRWRDILS
HARCKRRLGERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPHTLLNHSGL
SIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRVRMLY
YLRQEVIGEHADSVLRGADARDIDIWMPEMEQQEVPSGWWDTEADRSLLVGVFKHGYEMY
TTMRADDCLCFLERAGRPDDQAIDAEQHSADAELGDGGDDDKYSEDPEFKPASRHTKDLY
EEADSMNMGDDICVDDKPGPVKTKGPPTGLSGACEWPTSSSLTARLRRLITAYQRSYKRE
QLKVEAAEKGDRKRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVERIKEPNA
QEGVDAKLEWARFRTFARLDKKTDESLSRYFRCFMAMCRRVCNLRPARGEDPSDLGQSMA
PITEERASRTLYRISLLRRLRERVLPHPSMEESLLLAPLSSELPVWWSTPAHDRELMLGA
ALHGVSRTELSVFSDPQFSFSQAHHDYLEIQQNQPAPASPLRQPQAEEGSAVKEEEGLNR
ESGLLGASEALGHTDTQTTPLSRPDGKGRDRTGLGWKKSRGRGPRSEGRKGGGSGEGGMS
DLDSDSDSGSSTSSRRSESSDDSVDSDAERERAALKMEEDGENSLLSMTPSQDGVPPESL
TDPFRVDWPKDRVLINRLDSLCTLVLSGQWPTGRRYASDAQLNPGSDDLGAGDELSFARL
MRKGNSTPGGEGADGEESEFTVKLLKEEGLKLTFSKHALMSNGSGGEGSGRRKRRDQELS
DPDGAVPVVNAMTGTVLSGERAPRRRDMPNWLKENPEYEVEGDMLELLVNRSKRKKKRTE
KAVALSGSEKINIIDMRTGKKLGAAHGPMLQDLREFLEENPDTAVAPEWAETARCSGFLP
DSLFHRLLSAHSVIPKRDRHHSHHHAPQPDPLEDPLLGGGEEETLVSDGAYMMEDEDLED
SSFLTQAFDVKMEGGDSLSQGGYESSDREALLDDVIVPQKDSDSSSSSED
NT seq
7713 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccatcatggacctctttgatgatacgccgctgttcaacctggatgctctg
ccaggcgatgccttcacccagggttcctcagaccctgtggaggaggctctgaaactggct
ctggggcagattgaccccccctatgaacccaccccagctctctgcacaccagtcgcatct
ccaataatcccagacccagtccctgtgcagcagcaggcctccgtcccatttgccctccct
cagactgtttcaatcgcttcaacagtacctcagacaacactctctgtagccagtaacact
agtcgggctaccacagtcctgctgggctcacctctgactgtcaatagctctgctggcacc
acacaacagatcacaacacaacaatttaccacacagcagctcacacagattgcacagcag
cttactcctcagcagctagctgccatcacccagcaggccggggggcagggaggctccaag
atcgtcatcctgaaaggacctggggggcatgcacaggtgctgcagactgttcctgggaca
ggctctcaagcggggaaggtcacctttgccagggtactgtctggaacccaacttaggcct
ggcatgcagatactgtctgggggaacggtcctgaaccaagcgtctcctgggcagggaccg
gtgaaggtggggactgggatacagaggctagttcagtcgcccaacggacccctgaaacag
gtgcagttgatctccatgccccagggccagacgcaaactgtccagatgcaaataccgcag
gcccagcttgcccaatcgcaacaaatccagctacaaccccagacacaggtgcagctgcag
tctaccatgcaaacacaggttaccgccactgctacaggcaccacttcagtacgaccacaa
ggggttaccctcactacagtaccacagcagggtgaagctaagaggattaccctcgtgctg
cagcagccccatggtggcacgacccaggggggtgctgtgacggtgggtgggtcgggtcag
ctgcagcagggccagcagcagaggctggtgttaggtaacctcccagggaagctggtcctc
caagggggtcagctggctgctctcacccaggccagggcagggcagacaggggcgcagcct
aaagtacttaccatccagctgcaagtgcagcagcaacccaaccaacaggggggacccaag
tttcagctggtgtctggagggcaaggtagcagcccacaggtggttcagatctcccagggg
caaggtggacagagactggccatgcccctcaaactgttgctgcaaccacagatgagctcc
acctccacagcaggcggtaccgtctccgtagtgaaggtcatcaacacctcggctgctggc
tctgccccttccaccaccaccaccatggcatcaacagggatacggctagccaaggcccag
gagcctgtacggcgtgtggagacgctgggcaagcaggagaaggccaaccgcattgtggcc
gaggccattgccagagcaaaggcccggggagagaggaacattccacgagtcctcaaccag
gacgaactgcctcctggacagaaggctgctgacaaaggggctgctgcaacgaccactggc
acacctggagccaagaagaaggggggaggaggcgggagtaagaagaaaagcccaccaggg
gcgggggggaagggcatggcttgtgctgagaagaaaggcaaggccaaggcagcaggtgga
gctgctgtagggacacctgtaggggtggctggaaccagcggcagcaaaagcaaaagcaag
gcaaagatcaatacgatcactctagtggggggtaagaagaggaagaggaatgcatcctca
gaccactctgatggggacttgagccctgcctctccctctaaggccctggaggaggacatg
ttagcaaagaggcgctctaaccgtcaggtgaagaggaagaagtacacggaggacttggac
atcaaaatcactgacgacgaggatgagccggaggaggacgtggacgtaaccacgacggca
gcggtggcgtccattaccggaggggccgcggggcagctgatgggagagcagctcaaacag
gagctgcagttggacggggatggcctttccagcatgcagttctttgtggaaaaccccaac
gaggaagatgcagcaattgtcgacaaagtcttgtccatgaggctaactaagaaggaggtg
tctccaggacattatataaatgctgaggaattctttgtcaaatataagaactactcctat
atgcactgtgagtgggccactctggagcagctggagagagacaagaggatccaccagaag
ctgaagagattcaagatcaaacacgcacagatgagactcctcttacaggaggaggaggag
cccttcaacccagactatgtagaggtggaccggatcctggatgaatccaacagtgtggac
aaggacaatggagagccggtggtgtattacttggtgaagtggtgctctctgccctatgaa
gacgccacctgggagctgagggaggacgtggatgaggacaaggtggtggagtttaggaag
atccaggaccgccaacctcagctcaagagaacgccccgaccccaagcggctgcatggaag
aagctggaggaattcagagagtacaagagtgggaacgtacttcgagaataccagctagag
ggagtcaactggctgctcttcaactggtacaacaggcagaactgtatcctggccgatgag
atgggtctagggaagaccatccagtccatatctctgctgtctgaggtgcttggtgccggg
gtccaaggccccttcctggtcatcgcccccctctccaccatcaccaactgggagagggag
ttcgccacctggactgacatgaatgccatcgtctatcacggcagcctggccagcaggcag
atgatccagcagtacgagatgtactgcaaggacgacaaggaccatctgatcccaggggca
tataaatttgaagccctgatcacaacgtttgagatgattctgtccgactgccctgagctg
agggagatctcctggcgctgtgtgatcattgacgaagcccaccgcctcaagaaccgcaac
tgcaagctgctggacagcctcaagatgctggacctggagcataaggtgcttctgacaggc
actcccctccagaatacagtggaggagctcttcagtctgctgcactttcttgagccagct
cagttctcctcggagtccgagttcttacgtgactttggagacctcaaaacagaggagcag
gtccagaagctccaagctattctgaagcctatgatgctgcgcagactcaaagaggatgtg
gagaagaacttggcgccaaaacaggagaccatcattgaggtggagctgacagatgtgcag
aagaaatactaccgggccatcctagagaggaactttagtttcctcagcatgggggcaacc
agcaacagcaacgtccccaatctgctcaacaccatgatggagctgcgcaagtgctgcaac
cacccctacctcatcacaggggcggaggagtctattgtggctgagctgagggaggtgtac
gaccccatggtgccagacttccacctgcaggccctggtgagatctgcaggcaagctggtc
ctgctggacaaactgctgcctcgcctgaaggccgggggacacaaggtgctcatcttctcc
cagatggtgcgctgcctggacatcctggaggactacctcatcaacaagagatacctgtac
gagcgtattgatggcagagtgagagggaacctgcgtcaggcagccattgatcgcttcagc
aaaccagactcggaccgtttcgtcttcctgttgtgtacccgggctggaggcctgggcatc
aacctgactgctgctgacacctgcgtcatctttgactcagactggaaccctcagaatgat
ctgcaggctcaggcgcggtgtcaccgtatcggccagtccaaggcggtgaaggtgtaccgt
ctgatcaccaggaactcctatgagagggagatgttggacaaggctagcctcaaactgggt
ctggaccgggctgtactgcagagcatgagtggcaacaaggagagcaacgtcaacggacaa
atccagcagttctctaagaaggagatcgaggacctcctgaggaagggggcttacgctgcc
atcatggacgaggaggacgagggctccaagttctgcgaggaggacattgaccagattctc
cagaggagagcaaccaccatcaccatcgagagcgagggcaagggctccaccttctcaaag
gccagcttcgtggccaccgaaaacaggaccgacatcgccctggacgaccccgagttctgg
cagaagtgggccaagagggcagacatagactttgattccatgaataggaagaacactctg
gtgattgacacacccagagtaaggaagcagacccgtcagttcgctaccctgaggggcgag
ggcggggagatctctgaccccgacagcgacgacgagtacccgcccgccaattcccggcag
tcccggtcctcaaggcgctccgagcgccagaccggaaatggctatggccgcaccgattgc
ttccgtgtggagaaacaccttcttgtttacgggtgggggcgctggcgggacatcctgtct
catgcacgctgtaagcggcgcctcggggagcgtgacgtggagaccatctgcagggtcatc
ctggtcttctgcctgctgcattaccgtggcgacgagaacatcaagagtttcatctgggag
ctcatcacccccccagagaacggccgggaaccacacacactcctcaaccactctggtctg
tccatccctgttcctcggggcaggaaggggaagagggtgaaggcccagagctcatttgac
gttcagaaggtggagtggatccgcaagtacaaccccgactccctgcttctggacgacagc
taccgcaaacatctcaagcaccagtgcaacaaggtgttgctgagagtgcgtatgctgtac
tacctgagacaggaagtcattggagaacacgccgattctgtgctgagaggagccgatgcc
agggatattgacatctggatgcctgagatggagcagcaggaggtgccatcaggctggtgg
gatacagaagcagaccgctccctcctcgtcggtgtcttcaaacacgggtatgagatgtac
accaccatgcgcgccgacgactgtctctgtttcctggagagagctggtcgccctgacgac
caggccattgatgcggagcagcactctgcagacgcagagctgggagacggaggagacgat
gacaagtattctgaagacccagagttcaagcctgcgtcaaggcacaccaaagacctgtac
gaggaggctgactccatgaacatgggtgacgatatctgtgtcgatgacaagccggggcct
gttaaaaccaagggaccgcctactggcctgtcaggagcctgtgagtggccgaccagctcg
tcacttactgcgcggctccggcgtctgatcaccgcataccaacgcagctacaagagagag
cagctgaaggtggaggcagcagagaagggcgaccgcaagcgcaggaggtgtgagcaggcc
agtaagctgaaggagattgcacgccaggaacgccaacagaggtggacccgtagagaggag
tgtgatttctaccgtgtggtgtccacgttcggtgtcgagaggataaaagagccaaacgcc
caagagggggtggatgctaaactggaatgggcccgcttccggaccttcgcccgtctggac
aagaagacggacgagagtctgagtcgctacttccgctgtttcatggccatgtgccggagg
gtgtgcaacctgcggcccgcccgcggagaagacccgtcagatttggggcagtctatggcc
cccatcaccgaggagcgggcctctcgcaccctgtaccgcatcagtctgctgcgccgtctt
cgtgagcgtgtcctgccccacccctccatggaggagagcctgctgctggccccactcagc
tccgagcttcctgtctggtggagcactccggcccacgaccgggaactcatgctgggcgcc
gccctccacggcgtcagccgcaccgagctttcagtcttctccgacccgcagttctccttc
agtcaagcccaccacgactacctcgagatccagcagaaccagcccgcccctgccagtccc
ctccgccaaccacaggcagaggagggctccgccgtcaaggaggaggagggactgaacagg
gagtccggcctccttggagcttctgaggctctcggccacactgatacacagaccacaccc
ctctctcgccctgatgggaagggacgtgatcgcaccggcttgggctggaagaagagcaga
gggaggggcccgagaagcgaaggaaggaaaggcggaggaagtggagaaggagggatgtct
gatttggattcagactctgattcaggctcgtctacctcttcccggcgatcagaaagctct
gacgacagtgtggacagcgacgcagagagggagagagctgctctgaagatggaggaagat
ggagagaacagcttgctctcaatgactccatctcaagatggcgtgccaccggagtccctc
actgaccccttcagggttgactggcccaaggaccgtgtgttgataaaccggctggacagc
ctctgtacactggtgctgtctgggcagtggccgacagggcggcgctacgcctctgacgcc
cagctcaacccaggctctgacgacctaggggcaggggatgagctcagctttgcacggctc
atgcggaaaggcaacagcacacccggtggagaaggagcagatggagaggaatctgagttc
acggtcaaactcctcaaggaggaggggctgaagctgaccttctctaagcatgccttgatg
tccaacgggtcagggggagaggggagcgggcgcaggaagcgtagggaccaagaattgtca
gatccagacggagcggtcccggtggtcaatgccatgacaggcacagtgctgagtggggag
cgggcccctcgacgcagggacatgcccaactggctgaaggagaacccagaatatgaggtg
gagggagacatgctggagctccttgtgaacagaagcaagaggaagaagaagaggaccgag
aaggcagtagccctgtcgggcagtgagaagattaacataattgatatgaggacaggaaag
aagcttggggctgcgcatggacctatgctgcaggatctgagggagtttctggaggagaat
ccggacactgcagttgcaccagaatgggctgagactgcccggtgctctggctttctgcca
gacagcctcttccaccggcttctctccgcacactctgtcattcccaagagagaccgtcac
cacagccaccaccacgctccccagcctgacccactggaggacccactcctgggcggaggt
gaagaagagaccctggtctcagacggggcctacatgatggaggacgaagacttggaggat
tcttctttcctgactcaagcctttgatgttaagatggaaggcggcgacagcttgtcacaa
ggcggatacgagagttctgacagggaggcccttttggacgacgtcattgtgccgcagaag
gactcggactcttcctccagctcagaggattga
DBGET
integrated database retrieval system
