Oncorhynchus nerka (sockeye salmon): 115102790
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Entry
115102790 CDS
T07952
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115102790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115102790
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
hnRNP proteins
115102790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
UPF0688
PPP4R2
Motif
Other DBs
NCBI-GeneID:
115102790
NCBI-ProteinID:
XP_029478942
LinkDB
All DBs
Position
LG20:36796420..36816271
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AA seq
378 aa
AA seq
DB search
MLVGHLSLDTFFTYISRGGEVLRSEGADEVVVFAESTQDTCPHTLALRSVSELTDRPTIA
LHTDSMDLSPTTSSLMASNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFSKYGKIVG
CSVHKGFAFVQFANERCARAAVGAEDGRMIVGQVLDINLAGEPKPHRSKTAKRSAGELYR
SDSISPTFDLDYDFQRDYYDRVYSYPSRVPPPPPPLSRAVIPSKRPRISMTGGGSRRSKA
SFSSSSKSSQRASSRTMKTDDLQTIKKELTMIKHKVDYLLESLDRMEKDHSKKSDEKGAK
PEPGQVSSQQHCSIKKEESIKREREDLNDSEEEGDLLEEEEVKSQQREEEDDDEEEEEEG
EHVVGDDDGDSVNGDEDS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctggttggccacctttctctggacacgtttttcacgtatataagtcgtgggggcgaa
gttctgcgttctgagggtgctgatgaagttgtagtttttgctgagagcacccaagacacc
tgcccgcacacactggccctgcgctcagtgtcagaactgactgacagaccgacgatcgcc
ctgcacacagactctatggatctgtcccccaccaccagcagcctgatggccagcaacgtg
accaacaagacggacccgcgctcgctgaactcgcgggtctttatcgggaacctcaacacg
ctcctggtcaccaaggcagacgtggaggcaatcttcagcaagtacggcaagatcgtgggc
tgttctgtgcacaagggctttgccttcgtacagttcgccaacgagagatgtgcccgggcc
gctgtaggggccgaggatggacgcatgatcgtgggacaggtgctggacattaacttggct
ggagaacccaaaccccacaggtcaaagaccgcaaagcgctcggcgggagaattgtacagg
tctgattcaattagtcccacgtttgatctggactatgacttccagagagattactatgac
cgagtgtactcatacccatcccgtgtgccccctcctcctccacccttgtcccgagctgtg
atcccgtccaagcgcccgcggatcagcatgactggagggggcagccgccgcagcaaggcc
agtttctcctcttcctccaagagcagccagagggcatcctcaagaacaatgaaaacagat
gacctgcagaccatcaagaaggagctgacaatgattaaacacaaagtagactacctgctg
gagagcctagaccgcatggagaaggaccacagcaagaagtcagatgagaagggtgcaaag
cctgagcctggacaggtgtcctcacagcagcactgcagcatcaagaaggaggagagcatc
aagagggagagggaggatctcaacgactctgaggaggagggggatctgctggaagaggag
gaggtgaagagtcaacaaagagaggaggaggatgatgatgaagaggaggaggaggaggga
gagcatgtggttggagacgacgatggtgacagtgtcaacggagatgaggactcttag
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