Oncorhynchus nerka (sockeye salmon): 115102800
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Entry
115102800 CDS
T07952
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115102800 (ncstn)
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
115102800
NCBI-ProteinID:
XP_029478963
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Position
LG20:37079394..37095986
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AA seq
697 aa
AA seq
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MGLESSKWAIIFLVCWLYKNVSCNSVEQKIYVELNNTVPCVRLLNATHQIGCQSSISGDT
GVIHVLDSEADLEWPLSKGPNPPYMVLLESSLFTRSIMMKMKNESNRVAGVAVVVPNTSP
PEFSPHTTCPNENTGVYSDNYGPNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEF
IKQCYLDHNRAVNGSAPQYPLCAMQLFSHMHAVTNTPTCMRRNDINFSINPEMVCDPLGD
YNVWGSIRPYNDTVFGHKENESVVIAAARLDSRAFFWEVSTGAEGSISGFVTLLAAAQAL
REVTQEAPPTRNILFAFFQGETFDYIGSSRMVYDMENGKFVIDLDNIHSVLEIGQVAVHS
GTNLFLHSDPVSRRNNTVNDEVKNLVNNLQSSTAGLSFLLVEPNVSQPLPPSSLQRFLRA
QPIPGIVLADHESAFNNRYYESFYDNAANLNLTYPSDLSPEEQLEFVTDTAKSLTDVATV
VARALYKQAGGDESRGNNIKADPRIVTQMLYGFLVSSNNSWFQAVMAPELKNILKPSPPE
YYVGVAMSSTPTRLVQYLLANLTGAATNLTQSQCQKPDELPNESRQMYSYLWVQGIVPPN
STERDSFCVRASVRLTKAVSPAFELGEYASKDYSTWTESRWKFIKARIFLVASRDLEMLT
LGVGVAVLFTSLLVTYFISTKADVLFSSTREPASAAY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggaatcgtcgaaatgggctataatattcttagtttgttggctttacaaaaat
gtgagctgtaactctgttgagcagaagatttatgtggagctgaataacactgtaccatgc
gttcgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgataca
ggtgtgatccatgtcttggattctgaggcagatctggaatggcctttgagcaaaggaccc
aatcctccttatatggttctgttggaatcatccctcttcaccaggtccatcatgatgaag
atgaagaatgaatccaacagggtagctggggttgcagtggtggtcccaaatactagccca
ccagagttctcgccacacacgacatgtcccaatgagaacacaggtgtatactccgacaac
tatggtcctaatttggcacactgtaacactactgtatggaaccctcgggggaacggtcta
tcctatgaggaatttgacttccctgtcttctccttgaaagaagacaacgaaacagagttc
atcaaacagtgctacttggaccataatcgtgcagtgaacggcagtgccccgcagtaccct
ctgtgtgccatgcagctcttctcccacatgcacgcagtcaccaatactccaacctgcatg
agacgcaacgacatcaactttagcatcaacccagagatggtgtgtgaccctctgggtgat
tataatgtttggggttccatccggccctataacgacaccgtcttcggccacaaggagaac
gagagcgttgttatagcagcagccaggctggacagcagggcatttttctgggaggtttca
actggagcagagggaagtatctcagggtttgtcactctgcttgctgctgcccaggcactg
cgtgaagtcactcaagaggcccctcccacacggaatatcctctttgccttcttccaaggg
gaaacctttgactacattggcagctctcggatggtttacgacatggagaacggcaagttt
gtgatagacttggacaatattcactcagtactagagattggtcaggtggccgtgcatagt
ggcaccaacctctttcttcactcagaccctgtgtccaggaggaacaacactgtcaatgac
gaggttaagaatcttgtgaacaatttacagtcctccacggctgggctcagcttcttattg
gttgagcctaatgtctctcagccactcccgccctcctccctccagcgtttcctgcgagct
cagccaatcccagggattgtgcttgcagaccacgaatccgctttcaacaacaggtactat
gagagtttttacgacaacgctgctaacctgaacctgacttatccatctgacttgagtcca
gaggaacagctggagtttgtgactgatactgcaaagtcccttactgatgtggctacggtg
gttgcacgtgctctctacaagcaggccgggggagacgagtcccgaggcaacaacatcaaa
gcagaccccagaatagttacacagatgctgtatgggtttctggttagttccaacaacagt
tggtttcaggcagtgatggccccagaactaaagaacattctcaagcccagcccaccagag
tactatgttggtgttgccatgtcttccactccaactcgtctggtccagtacctcctggcc
aatttaactggagcagccaccaacctcacccagagtcagtgccagaagccagatgagctg
ccgaacgagagcagacagatgtactcctatctctgggttcagggcattgtcccacccaac
agtaccgagagggattctttctgcgtacgtgcatcggtacgcctgaccaaagcagtgtcc
cctgccttcgagctcggagagtatgcttccaaagactattccacgtggacagaatcacgg
tggaagttcatcaaagctcgaattttcctagtagcgagccgggacttggagatgctgacc
ttaggtgtgggagtggctgtgttgttcacatccctactggtgacatacttcatcagcacc
aaggcagacgtcctcttcagctccacgagggaacccgctagcgccgcctattga
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