Oncorhynchus nerka (sockeye salmon): 115102895
Help
Entry
115102895 CDS
T07952
Name
(RefSeq) trichohyalin-like isoform X1
KO
K20645
Rho GTPase-activating protein 30
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102895
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115102895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
115102895
NCBI-ProteinID:
XP_029479178
LinkDB
All DBs
Position
LG20:44214122..44231089
Genome browser
AA seq
1393 aa
AA seq
DB search
MRRLRRKGGNNEKVFGCHLLDHLATSCQEIPQVLRSCSEFIEKHGVVDGIYRLSGVSSNT
QKLRGEFDSEGTPDLNKDVYLQDIHCVSSLCKAYFRELPNPLLTYQLYDKYAEAVAIQLE
DERLVKIKDVLKELPAPHYRTLEFLMRHLVKMASYSSHTNMHARNLAIVWAPNLLRSKDI
EASGFNGTAAFMEVRVQSIVVEFILTHVPQLFPGSGIGLECLKSFPSPSIHNPEKRLFPA
IPLQLGNISPGDGPPAMRSYHAIIDGTDKRKGSLKSRKWKSIFNLGGRLQDPRGRNKNST
KEKERTVLRPAKSMDSLSSMPYSHEGSRQRVPSTVISPLAQPSPCPQGGADGGASTNGSD
VGSGYAVTFRRGQGASVSVVSGGGGTKGTYSRLGSHCSGGNSTEALQPPSRSPGISSKAD
RRAGIHISGPFSVTVPLHITSGLAFGVLQGGGAERRNHSGGEGSRDKGEGGEGVRQEGGE
GERHIRVAVVGEDETDGVKRRDQEVSEERRDMDDKVEGKEDRGKEEELNGDCVSKPLEER
GEEGEGGGEDKVNHENDEEEDEEGEHMEIKGSVQTALDARNGVRNEAVATDVPYPTTMEE
DDAQVQDCPLDFQDTFGFLDLMDSSASTKMFQAFSVEPHHAEDEYEDELEQRSPGLSYDK
PDSVTQPPVDTQTQIQTGCQTETHTLRQTQTPTHRPLSFDQYERANKSMSLPYISRPFLP
ARCSSSEEEDNDDEDADYDREDEEDDDDMFCKSLPSSLVFNRLTWSGPQPDMENGLSLPA
KPSQQLDNASDDRSIGIGLSQSSEARMPPEHLDIDSPDCCNPLEEVLRHSKAEEENRLEA
IDLLEDTRQDPDNQEKDHADTLTNTCTESTVVTCHSVETSMMKEEETPGDIERGLASASS
STDCEEASLQTTAEEEDTGVHRGGLHCGEGVISKGYNGDTVSEAEKEDSQEHLLSACRIV
SCAEEPKNILNERSEVVSAGGAMEQPENSAERDSEGKKEDVEEEMEEREDRNGGEFNKQE
GEVTRIETEEREVLKELEETEGEDFGAREQKGMIEEEERIAGEEGEVGEEDIYEIMSVLA
RDDMMESGDRKDREGETEERKVMEEVIETKEGESIRVQQKEIDKEGESRASEEMSAKEET
KREVEGVDTMGETEEEAAEEGMENMLINNEEHKQDLEAQHVLERRERAIDLMKDVVEEGD
EEGDKEMEVGGVIRDEEGDSIHVVQQETEERESTGPNKENQERENEEETKDQLQIPTIIE
ESEEELKEVQIYIKELNEGQKEGRGSKVGSEKGVGRVLVRSKQKTPPKVFQARSVPMVPP
KPHHCRITALNLRQEQQRERREADRARGKGKVHRALGQQDKAKERKMEGKPEHDKVCETE
QQWNEKGEDEGRG
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgcggagactccggagaaaaggagggaacaatgagaaggtgtttggctgtcacctgttg
gaccacctggctacaagctgtcaggagattcctcaggtgctgcgaagctgcagtgaattc
attgagaagcatggggttgtagatgggatctacaggctatctggggtgtcatccaacacg
cagaaacttcggggtgagtttgacagtgagggaaccccagatctcaataaggatgtgtac
ctgcaggacattcactgtgtcagctctctctgcaaggcctacttcagagagttgcccaat
cctctcctcacataccagctctatgacaaatatgctgaagctgtggcaattcagctggag
gacgagaggctggtgaagatcaaggacgtgctaaaggaattacccgctccccattacaga
actctagagttcctgatgcgtcaccttgtaaagatggcttcttattcctcacacaccaac
atgcatgcccggaaccttgccattgtttgggctccaaaccttctcaggtcaaaagacatt
gaggcgtcagggtttaacggtactgcagccttcatggaggtgagggtccagtccatcgta
gtggaattcatcctcacccacgtgccccagctgtttcctggttcaggtattggtctggag
tgtctaaagtcattcccatctccctctatacacaatccagagaaacgtttattcccagcc
attccactccagttaggcaacatcagcccaggggacggccccccggccatgcgctcctat
cacgccatcatcgacggcacagacaagaggaagggatctctcaagagcaggaagtggaag
tccatcttcaatttaggaggcagactccaagacccgagaggaaggaacaagaactcaacc
aaagaaaaagagagaactgtcttaaggccagccaagagcatggattccctgagctcaatg
ccctattcgcatgaaggttccagacaacgagtcccttccactgtcatatcccccctggct
cagccctctccctgtccccaaggtggtgcggatggaggggcatccactaatggtagtgat
gtgggcagcgggtatgctgtgaccttccggaggggtcagggggctagtgtgagtgtagtg
agcgggggcgggggaaccaagggcacatacagtcgactgggcagtcactgtagcgggggc
aacagcactgaggctctgcaacccccatccagatccccaggaatctccagcaaagcggac
cggcgggcagggatacacatctccggacctttctcagttaccgttccccttcacatcaca
tcaggcctggcctttggggtgctgcagggaggtggtgcagaaaggcgaaaccatagcgga
ggagaggggagccgagataagggagagggtggggagggtgtgagacaggagggaggggaa
ggggaaaggcacattcgagtggcagttgtgggggaggacgagactgatggagtcaagaga
agagatcaagaggtatcggaggagaggagagatatggatgataaagttgaaggaaaagaa
gacagaggaaaggaggaggaactgaatggggactgtgtatctaagccattagaggagagg
ggtgaagagggtgagggtggaggagaggataaagtaaaccatgaaaacgatgaagaggag
gatgaagagggagaacacatggaaatcaaaggctctgtgcagactgccctggatgcccga
aatggtgtcagaaacgaggcagttgccacagatgtgccgtaccctacgacaatggaggag
gacgatgcacaagtccaggactgtccactagactttcaggatacttttggattcctggac
ctcatggacagcagtgcttccaccaagatgttccaggcgttctcagtggagcctcatcat
gcggaagatgagtatgaggacgagctggagcagagatcccctggactctcatatgacaaa
ccagactctgtcacacagccacctgtagacacacagacacaaatacagacaggctgccaa
acagagacacacacactgaggcagacacaaactcccacacacagacctctaagctttgat
caatatgaacgagccaacaagtcaatgagtctaccgtacatatccaggcccttcctgcct
gctcgctgctcttcctctgaagaagaggataatgacgacgaagatgctgattacgacaga
gaagatgaggaggacgatgatgacatgttctgtaaaagtctaccatctagtttggtgttc
aatagactgacatggagtgggcctcagcctgacatggagaatggtttgtccctcccagct
aagccctcacaacaattggacaatgcttctgatgacaggtccataggaattggtctatca
cagagttctgaggccagaatgcctcctgagcacttggacattgattcccctgattgctgt
aacccattagaagaggtcttgaggcatagcaaggctgaagaagagaatagactggaagcg
atagacctgttggaggatacaaggcaggatccagacaaccaggagaaagaccatgcagac
acactgacgaatacatgcacagaaagcactgttgtcacttgtcactcggttgaaacgagc
atgatgaaggaagaggaaacaccaggtgacattgagagaggcctcgcttccgcatcctct
tcaactgactgtgaggaggcctcactgcagaccactgcagaggaagaggacactggagtt
caccgtggtggacttcactgtggtgaaggtgtgatttcaaagggttacaatggcgatacc
gtgagcgaagccgagaaagaagattcacaagagcatttactctctgcctgtcgtatagtt
tcctgtgctgaagagccaaagaacatactcaatgagcgatctgaggtagtttcagctggg
ggcgcaatggagcagcctgaaaatagtgctgagagggatagcgagggaaagaaggaagat
gtcgaggaagagatggaggaaagagaagatagaaatgggggagaatttaacaaacaagaa
ggagaggtaacaagaattgagactgaggagagagaggtactaaaggagttggaagaaaca
gaaggggaggactttggggcgagggagcaaaaaggaatgattgaagaagaggaaaggata
gcaggtgaggaaggggaggtaggagaagaagacatttatgagataatgagcgtattagcc
agggatgacatgatggaaagtggagataggaaggatagggaaggggagactgaggaacgt
aaagttatggaggaggtgatagaaaccaaagagggagagagtatcagagtacagcagaaa
gagatagataaggaaggagagagtagggcaagtgaagagatgagtgcaaaagaagagacg
aagcgagaggtggaaggagtggataccatgggagagactgaggaagaggcagctgaagag
ggaatggaaaatatgttgattaataatgaggagcataaacaggacctagaggcccagcat
gttttagagagaagagaaagagctatagatctgatgaaggatgttgtggaagagggagat
gaggagggagataaagagatggaagtgggaggtgtaatcagagatgaagaaggagatagt
atacatgtggtccaacaggagacagaggaacgtgaatcaacaggaccaaataaggagaac
caagagagggagaatgaagaagagacaaaagaccaactacagataccaacaataatagag
gaaagcgaggaagaactgaaagaggtccagatttacatcaaagaattgaatgaaggacag
aaggaagggagaggtagtaaagtggggtctgaaaaaggggtggggagagtgctggtcagg
tctaaacaaaaaacaccccctaaagtgtttcaagcaagatcagtgccaatggtaccaccc
aagccacatcactgccgaataactgcactgaacctcagacaagagcagcagagggagaga
agagaggcagaccgagccagggggaagggaaaggtacacagggctttgggacagcaagat
aaggccaaagagagaaagatggaaggaaagccagagcatgacaaagtctgcgagacagaa
caacagtggaatgagaaaggggaagatgaggggagaggctaa
DBGET
integrated database retrieval system