Oncorhynchus nerka (sockeye salmon): 115102932
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Entry
115102932 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: GATA-binding factor 6-B-like
KO
K17897
GATA-binding protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102932
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115102932
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
115102932
NCBI-ProteinID:
XP_029479245
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All DBs
Position
LG20:complement(45213464..45221154)
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AA seq
507 aa
AA seq
DB search
MDLGENSWSMVKQEVSSSPGSPAEQSYLHGGQGQEDSHGHAHDSEGLRSPPTTDQLDLVG
HRRDEGPGRPSLHSYVHFGHGHHNNNTALPTTEDITLFTDLDQGNKLIISSGAHPHHKGG
LIVDPSDMYQTLAIAAAHQSQAGYDSPSGGYMHSNPNSPVYVPSSRVGPMISSLPYLQAS
GSAQPSHSVWSQSTPESPSYSTGSPHTSNRFHYPPSPPMNNVASRDNGYSNPLNVGSRDQ
YGLPRPLGGSYASPYSPYVGPQLSQLSSPWPGGPFDNTMLHTLQSRGAPLTIRGPNGDIL
DDLGESRECVNCGSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRMSSSRRIG
LSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKT
KGSSGNSNSVAMTPTSTSSSNSEDCSKNSSPNTQVQSSVLSGPADGSGSDVVKYPGQDSL
YTSVGLTQSPDIAGSVRGESWCPMALA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcgaaaacagctggtccatggtcaagcaagaagtgtccagcagcccaggg
tcaccggctgaacagagctacttacacggcggtcagggacaggaggacagtcacggccac
gcgcacgactcggagggactcaggtcaccgccgacaaccgatcaacttgacttagtggga
caccggcgcgacgaggggccaggtagaccatctctacactcctacgttcacttcggacac
ggacaccacaacaacaacactgccctgcccaccacagaggacatcacgctgttcacggat
ttagaccagggcaacaaactaatcatctctagtggagcgcacccgcaccacaaggggggc
cttatcgtcgaccccagcgacatgtatcaaacactagccatcgcggcggcccaccagagc
caggcggggtacgactcgccctctgggggctatatgcactccaaccccaactctccagtg
tatgtaccgagctcccgggtgggacccatgatatccagcctcccttatttgcaagccagc
gggtcggcacagcctagccattcagtctggtcgcagtctactccggagagtccctcctac
agcaccgggagtcctcatacctccaaccgtttccattaccctccaagcccgccaatgaac
aacgtagcgtccagggataacggctacagtaacccgctgaatgtgggcagtcgagaccag
tacggtctcccgcggcccctcggtggatcctacgccagtccctactccccgtatgttgga
ccgcagctatcccagttgtcctcgccttggcctggaggaccattcgataacaccatgttg
cacactttgcaaagcagaggtgcgcccttgacgattcgaggacccaatggagatattctc
gacgacctgggagagagcagggaatgcgtcaactgcggctccatctcaacgccgctctgg
agacgcgatggcacgggccactttctctgcaacgcctgcggcctgtacagcaaaatgaat
ggactcagtcggccattaattaaaccacagaagcggatgtcatcatcccggcgaatcggc
ctctcctgcgccaactgtcagacgagcacaaccaccttgtggcgcagaaacgcagaaggt
gaaccggtctgcaacgcatgtgggctctacacaaaattacatggagtacctcggccgctc
gcaatgaagaaagagggaattcagacgaggaaaagaaaaccgaaaactttgaacaaaacc
aagggatcctctggaaatagtaattcagtcgccatgactccgacgtcgacgtcttcttcc
aactctgaagactgctcgaagaacagctctcccaacacgcaggtccagtcctctgtcctg
agtggaccagcggatggctcaggctctgatgtcgtgaagtacccaggccaggatagtctc
tacaccagcgtgggcctcacccagtctccagacatagccggctccgtcaggggagagtcc
tggtgccccatggctcttgcctga
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