Oncorhynchus nerka (sockeye salmon): 115102958
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Entry
115102958 CDS
T07952
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115102958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102958
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115102958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank
Ank_4
Ank_5
Roc
PH_6
DUF908
Motif
Other DBs
NCBI-GeneID:
115102958
NCBI-ProteinID:
XP_029479293
LinkDB
All DBs
Position
LG20:complement(46942941..47178865)
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AA seq
1419 aa
AA seq
DB search
MRVCFNWARLCRPVCGGVQGRAMLLLSSQATERTNPGATSKAVTAHQSGGGKTAVDHISV
ILNGTLGREEVGSRSVAGQVARYAALEQSHPAAGSTRARQQALQGEEGRFSLGRIRQDLG
RWPSLSHTGRVERRREDAVQEEEEEVEKEDGGEMTTDRFLQLQQPSNNSAAPAAAQPSQS
DWETTAVGVEVDTATAAPEQQKTQVETQGQDISPQYEGSLLGHNGGVLASGGRLPRAVLR
RKPSQDSAAPDSRRVVSMYGAPAWQQRGSLSDQDRTDKPRRPRSVCMLGGPNLNPALLQP
GSHRSHSQQSSRRVATGSLDGPPQQCWTRRAELRAVDGLKPGVLPQRTVAEEKGVPRVRQ
QTWKQRPVSMTMLELRKKASGSQDELDSHRGSQVRGLFGRWRIFGRPAQDKEKDKEGARA
PGSKPPSRLDVPKKTLSSLRRSLSLRIRRNRPRGRVEISEVTAEERSRTKSIGQETSLPS
RPFSYLTGRSLPPPYERDNDGGMQNIQYHSQGKVKVMEVPLYPARLSSSTKPAHEEPSVW
QLIASRFRRKEQQQPPNGKCKLQPQPLSKETGKYPLAGNKKPQLVSIETLAGINCSKGQD
SFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEMVVDG
QSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLSSYRNTAEVPMVL
VGTQDAISAANPRVIDDSRARKLSNDLKRSTYYETCSTYGLNVERVFQDVAQKVVALRKK
QQLSIGPCKSLPNSPSHSSVPNASLPSVHINQAANGGVAFSDYSSSVPSTPSISQREMRI
ETIAASNTPTPIRKQSKRRSNIFTSRKANSEQAKTTDSKTDSIGSGRAIPIKQGILLKRS
GKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVTTI
APTASPKTNGLTKDRSTLQLGVGTTGAPHSNSNTSLQSERSVSGGGLVGFGGSKDSMHQR
SFSVSSADQWNEAVINTSASTGAANGMGEPLTCSSGVGSATSPKLEPPPSPHANRKKHRR
KKSTGITKPDGPSAGNEESEESFEFIIVSLTGQMWHFEASTFEERELWVTAIENQIFASL
QSCESMKNKSRLGSQSDAASIQSIRNVRGNSICVDCDAANPDWASLNLGALICIECSGIH
RNLGTHLSRVRSLDLDDWPVGLSMVMMAIGNAMANSVWEGALEGYTKVGADSTREERERW
IRAKYEQKLFLVGLPQSDVPLGQQLLRAVVEDDLRLVVLLLAHGTKEEVNETYGDGDGRT
ALHLSCAMANVVITQLLIWYGVDVKSRDARGQTPLSCARRAGSQECSDILLQHGCPNDPV
SSSSLTTPNMSRRNPNVNPNPNVNNNNALSELNRSVSIM
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtgtttcaattgggctagattgtgcaggcctgtgtgtgggggagtgcagggc
cgtgccatgctactactgagcagtcaggcaacggagcggactaaccccggggccacaagt
aaagctgtcacagcccaccagtcaggaggaggtaagaccgcggtggaccacatttctgtc
atcctgaatggaactctgggccgtgaggaggtgggttcgaggtcggtggcgggccaggtc
gcccgatatgccgcactggagcaaagtcatcctgcagccgggagcactagggcacgacag
caggcgctgcagggggaggagggacgcttcagcctgggcaggatacggcaggatcttggc
aggtggccctccctgagccacacaggcagagtggagaggaggagggaggatgcagtgcag
gaggaggaggaggaggtagagaaggaggatgggggggaaatgacaacggaccggtttctc
caactgcaacagccctccaataactcagcagctccagcagcagcccaaccttctcagtca
gactgggagactacagcggtaggagtagaggtagatacagccacagcagctccagagcaa
cagaagacccaggtagaaacccagggacaggacatttctccccagtacgaagggtctctc
cttgggcataatggtggtgttctggccagcggtggccgtctaccccgggcagtgctccgc
aggaagccatcccaggacagtgctgcgccagacagcaggagggtggtgagcatgtatgga
gccccagcctggcagcaacgaggctcgctaagtgaccaggacagaacagacaaacccagg
aggcccaggagtgtgtgcatgctgggaggccccaacctcaaccctgccctgttgcagcct
gggtcccacaggtcccactcccagcagagctccagaagggtggctacaggatctctggac
ggtcccccgcagcagtgctggaccaggagggcagagctgcgggcggtggacggcctcaag
ccgggggtgctccctcagcggacagtggctgaggagaagggggtccccagggtccggcag
cagacctggaaacagagaccagtcagtatgacaatgttggagctgaggaagaaggcctct
gggtctcaggacgagctggatagccataggggaagccaggttagaggtctgttcggccgc
tggaggatctttggccgaccagcccaggacaaggagaaggataaggagggagcccgagcc
ccaggttccaagccccccagcaggctggacgtccccaagaagaccctgagctccttacgc
cggagtctcagtttgcggatcaggaggaaccggccgcgggggagagtggaaatatccgaa
gtgacggcagaggaacgctcacgcactaaaagtattgggcaagagacatctctcccctcg
cggcccttctcctacctcaccgggaggtccctgccacccccttacgagagggacaatgat
ggagggatgcagaacattcagtaccacagccagggcaaggtcaaggtgatggaggtgccc
ctctacccagccagactgtcctcctccactaaaccagcccatgaagagcccagcgtgtgg
cagctcatagccagccgctttaggaggaaggagcagcaacaacctcccaacggtaaatgt
aaactccagccccaacccctgagcaaagagactggcaaatatcccctggctgggaataaa
aagcctcagttagtttccatagagactctggcaggcatcaactgcagcaaaggtcaagac
tctttcgtcaacagccaagaatggacattgagtcgatcagtgccagagctcaaagtgggt
attgtgggtaatctgtcgagcgggaaatcggcccttgtccaccggtacctgacaggcacg
tacgtgcaggaggaatcccctgaaggtggtcggttcaagaaggagatggtggttgatgga
cagagctacctgctgctgatcagagatgagggaggccccccggagctgcagtttgcagcg
tgggtagacgctgtggtgtttgtcttcagtctggaggatgagatcagtttccagacagtc
tacaactacttcctgcgtctgtccagctacaggaacacagcagaggtccccatggtcctg
gtcgggacgcaagatgccatcagtgctgccaaccccagagtgatcgatgactcacgggcc
aggaagctgtccaacgacctgaagcgttccacctactacgagacctgctccacctacggc
ctcaatgtggagagagtcttccaagatgtcgcccagaaggtggtggctctgaggaaaaag
cagcagctgtctattggtccgtgcaagtcccttcccaactcgcctagccactcatcagtc
cccaacgcatccctcccctctgtgcatattaaccaggcggcgaatggcggggttgcgttc
agcgactactcctcctcggtgccttccactcccagcatcagccagagggagatgcgcatc
gagaccatcgccgcctccaacacgcccacccccatccgcaagcagtccaagcgccgctcc
aacatcttcacatcacggaaagccaacagtgaacaggcaaagaccactgacagtaaaaca
gatagtataggcagtggaagggccatacccatcaaacagggcatccttctgaagagaagt
gggaagtccctgaataaggagtggaagaagaaatacgtcactctttgtgacaacggcctc
ctcacctaccacccaagtttacatgattacatgcagaatgtgcacgggaaagagattgac
ctgttgaggaccacggtcaaggtgccagggaaacgaccacccagagcagtcaccactatc
gcccccaccgccagccccaagacaaacgggctgaccaaggaccgcagcaccctgcagctg
ggcgtaggcaccacaggtgcgccccattctaacagcaatacatccctccagtcagagcgt
tcggtcagcggaggaggcctggtgggcttcggtggcagtaaggacagcatgcaccaacgc
tccttctctgtttccagtgccgaccaatggaacgaggccgtcatcaacaccagtgcaagc
accggggccgccaacgggatgggcgagcccctaacctgcagctctggagtgggcagtgcc
accagtcccaagctggagcctcccccctcacctcacgccaaccgcaagaaacacagacgg
aaaaagagcacgggcatcaccaagccagacgggccgtctgcaggcaatgaagagtcggag
gagtcgtttgagttcattattgtgtctctcacgggccagatgtggcatttcgaggcgtct
acgtttgaggagagggagctgtgggtcacagctatcgagaaccagatctttgccagcctg
cagtcttgcgagagcatgaagaataagtcccggttaggcagccaaagtgatgcagcgtcc
attcagtccataaggaacgtgagagggaacagcatctgtgtggactgtgatgcagccaac
ccggactgggccagtcttaacctgggggctctgatctgtatcgagtgttcagggatccac
aggaacctggggacccacctgtcaagggtccgctccctggacctggatgactggcccgtg
gggctcagcatggtgatgatggctataggcaacgctatggccaacagtgtctgggagggg
gccctggaggggtacaccaaggtgggcgctgacagcaccagggaggagagggagcggtgg
atccgggctaagtatgagcagaagctgttcctggtgggtctcccgcagtcggatgtgccc
ctggggcagcagctgctccgggccgtggtggaggacgacctgaggctggtggtgctgctg
ctggcccacggcaccaaggaggaggtcaacgagacgtacggagacggggacggacgcacc
gccctgcatctgtcctgtgccatggccaacgtggtcatcacccagcttctcatctggtac
ggtgtggacgtgaaaagtcgggacgcgcgcggccagacgccgctgtcctgcgcccggcgg
gcaggaagccaggagtgttctgacatcctgctccagcacggctgccccaatgacccggtc
agcagcagcagcctcaccacccccaacatgagccgcagaaaccccaatgttaaccccaac
cctaacgtcaacaacaacaatgccctcagtgagctcaaccgcagtgtcagtataatgtag
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