Oncorhynchus nerka (sockeye salmon): 115103052
Help
Entry
115103052 CDS
T07952
Name
(RefSeq) junctophilin-1-like isoform X1
KO
K19530
junctophilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
115103052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MORN
CMV_1a
Motif
Other DBs
NCBI-GeneID:
115103052
NCBI-ProteinID:
XP_029479506
LinkDB
All DBs
Position
LG20:52945391..52962729
Genome browser
AA seq
679 aa
AA seq
DB search
MTGGRFDFDDGGTYCGGWEDGKAHGHGVCTGPKGQGEYSGSWNNGFEVVGVYTWPSGNVY
QGYWAQGKRHGFGVESKGKWIYRGEWTHGFKGRYGVRQSLHTPARYDGTWSNGLQDGYGV
ETYGDGGTYQGQWTGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGTVLHANL
DLSDSLAGTRGGFVLNFHSEGEGEKKKGLFRRGSLFGSLRNLRKSDSRSSISSKRSSARS
DAASSISRISSSDANSTISFGDGVDEYMPLEDNVDATTTESYMGEWKNDKRNGFGVSERT
NGMKYEGEWMNNKRHGYGCTMFPDGTKEEGKYKNNVLARGIKKQLIPLKNTKTKQKVDRA
VEGAIRAAAIAKTKVEIATSRTAHARTKGDAADQAGQSASQDSDIARAVARELSPNFHQP
GPDYIKQRFNEPIEPIVQEEKKEKSSSSSPHFYRKGTTPDHSPTATPQPSPPPTPPPAPA
PEPKKSLFSKLTPKPGKENKTPSAESQAPVITKAVSKTSLKQEVRQEVPPQPKTFKMAES
VPVSPGNGQLHTDTEYHGYYMKADVKIPPDEPEGVEEEHVTPSTFAQMPQPAKPMAQYRT
PTPKPGAPKSAAKESKPELTLKKQDSYKPKSLAETRKQASLEITTDFVEEESVSNSYCMM
MKMGKLKQRERKVSFQNNV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggacggttcgattttgacgatggtggcacatattgcggtggctgggaggat
ggaaaagcccatgggcatggcgtctgtaccgggcccaagggccaaggagaatactccggg
tcctggaacaatggttttgaggtagtgggggtgtacacctggcccagtggaaacgtgtat
cagggttactgggcacaggggaaacgacacggattcggtgtggaatcgaagggaaaatgg
atttatcgtggtgaatggactcatggatttaaaggtcgatacggggtccggcaaagtctc
cacacgcctgctagatacgatgggacatggagtaacggtctgcaagatggatatggagtt
gaaacgtatggtgatggaggtacgtaccaggggcagtggacaggagggatgcgacacgga
tatggtgtgcggcaaagtgtaccttacgggatggctacggttattcgctcgcctcttcga
acctcgctggcctcgctccgcagcgaacagagcaacggcaccgtcctccatgccaacctc
gacctgtcagacagccttgccggcaccagaggaggctttgttctcaacttccacagcgaa
ggcgaaggtgagaagaaaaaaggcctgttccgaagagggtccctgttcggcagcctcaga
aacctcagaaagtctgactccaggtcgtccatatcaagcaaacgcagctccgcccgcagc
gatgccgccagctccatcagccgaatcagctccagtgatgccaattccaccatcagcttc
ggagatggagttgatgagtacatgcccctggaggacaatgtagatgccaccaccactgag
tcctacatgggggagtggaagaacgacaagcggaacggctttggtgtcagcgagcgcacc
aacgggatgaagtatgagggagagtggatgaacaataaacgccacggctacggatgcaca
atgttcccagatggcaccaaagaagaggggaaatataaaaacaatgtgttggcgcgaggc
atcaagaaacagctcattcctctcaaaaacaccaaaactaaacagaaagtggatcgggct
gtggaaggagccatacgggcagcagctattgccaaaacaaaagtagaaatagccacttca
agaacggctcacgccaggactaaaggtgatgctgctgaccaggccggtcagtcagccagt
caagactcagacatcgccagggcagtggccagggaactgtctcccaacttccatcagcca
ggccctgattatataaagcagaggttcaatgaacctattgaacctattgtccaagaggag
aagaaagagaagtcctcctcaagcagccctcatttctaccgtaaaggcacaaccccagac
cactctcccactgcgactccccagccctctcccccaccaacacccccaccagcgccagcc
ccagagcccaagaagagcctcttcagcaagctcacccccaagccagggaaagagaataaa
accccttccgcagagagccaggccccggtcatcacaaaggcagtctctaagacatcgttg
aaacaggaagtaagacaagaagtgcctccccaaccgaaaactttcaagatggcggagtcg
gtccccgtcagccctggcaatggacagctgcacactgacactgagtaccacggctactac
atgaaggcagacgtgaagatccccccagatgaacctgagggagtagaggaggagcatgtt
accccgtccacctttgcccagatgccacagcccgcaaaacctatggcgcaatacaggaca
cccaccccaaaacctggagcgccaaagtcagcagccaaagaaagcaaacctgagctaaca
cttaagaaacaagattcgtataagccaaaaagcctagcagaaactaggaaacaagccagc
ttggagatcaccacggatttcgtagaggaagagtcagtaagtaactcatactgtatgatg
atgaaaatgggaaaactgaagcaaagagaaagaaaggtgtcatttcagaacaacgtatga
DBGET
integrated database retrieval system