Oncorhynchus nerka (sockeye salmon): 115103067
Help
Entry
115103067 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115103067
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115103067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Phage_holin_3_6
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
115103067
NCBI-ProteinID:
XP_029479534
LinkDB
All DBs
Position
LG20:complement(53621800..53652754)
Genome browser
AA seq
807 aa
AA seq
DB search
MITRNGLLLVFWFLLDKGFLAPLHSPPQSRMGREHHLRGMAGLGLRRHGASGVQRVKRGW
VWNQFFVLEEYMGSEPQYVGKLHTDLDRDDSEVKYTLSGEGAGTIFTIDQTTGDIHALMG
LDREEKSYYTLRAQAMDMHTGRPLEPESEFIIKVQDINDNEPKFLEGPYTASVPEMSPGG
TFVMQVTATDADDPTYGNSARIVYSILHGQPYFSVDSKTGVIRTALPNMDREMKELYQVL
IQAKDMGGQLGGLAGTTTINVTLSDVNDNPPRFSKSILHLRVPESSSVGSAVGKVRAHDL
DSGKNAEVEYSIVPGDEGNMFDITSNGHSQEGIIVLRKHLDYENKRSYTFKVEASNAHLD
PRFLHLGPFKDTTTVKVNVLDVNEPPVFTKTSYTIDVYEDTPVGTIIGSVTAQDLDASSS
AVRYSIEWKRPVDSCFDIDTVEGTISTNEMLDRESNRQHNISVVATKVNNPLLSNKVTVT
VNVLDVNEFPPELAVPFDTFVCENAEVGQVIQTISATDKDLPAVGQRFFFKSPREIRNRN
FTVRDFGNNTAGIVTKHVGFQRRVQEYYVIPVVVEDNGYPAQSSTGTLTVRVCACVTEGS
LLSCTAEAVFLPMGLSTWAVMAILLCMVILLAIFALYVGLRRQKKRETLMSSKEDIRDNV
IHYDDEGGGEEDTHAFDMGTLRNTKATKEKMLRRGTGSEVTAQTEINESTTTEGSADIIR
DYIHQRLQENHLGFSAPPYDSLVTYAYEGDGSVGESLSSIESSMADGGEDFKYLSEWGPP
FKTVAGILDKDKTDPPAAEVEESQEYL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaggaacggtctcctgctggtcttttggtttctcttggacaaaggcttcctg
gctccccttcactctccaccccaaagcaggatgggaagagagcaccacctgaggggcatg
gcaggactgggactgaggagacatggggcgtcaggggttcagagggtaaagcggggatgg
gtgtggaaccagttctttgtactggaggaatatatgggatctgaaccacagtacgttgga
aagcttcacacagacctggacagggatgacagtgaggtgaagtacactctctcaggagaa
ggagcaggcaccatcttcaccatagaccagacgacgggcgacatccacgccttgatgggt
ttggacagagaggagaagtcttactacacattacgagctcaggctatggacatgcacaca
ggcaggcctctggaacctgagtctgaattcatcataaaagttcaagacataaatgacaat
gaaccaaagtttttagagggtccatatacagccagtgtcccagagatgtcaccaggaggt
acttttgttatgcaggtgactgccacagatgctgacgaccccacctatgggaatagtgca
cggatcgtgtacagtatcctacatggacagccttacttttccgtcgactccaaaactggg
gtgataaggactgctttacccaacatggaccgtgaaatgaaggagctgtaccaggtcctt
attcaggccaaggatatgggcgggcagctggggggactagccggaacaaccaccatcaac
gtcaccctcagcgacgtcaacgacaacccccccaggttttcaaaaagtattctccacctc
agggtcccagaatcatcgtctgtgggctcagcagtagggaaggtcagagctcatgacctg
gactctgggaagaatgcagaggtggaatattctatagttcctggtgatgaaggcaacatg
tttgacatcacctccaacgggcacagtcaggagggaattatagtccttagaaaacatctc
gactacgaaaacaaaaggtcgtacacctttaaagtggaggcctccaatgctcacctggac
ccccggttcctccacctgggccctttcaaagacaccaccacagtcaaggtcaatgtgctg
gatgtgaacgaaccccctgtgttcactaagacctcttacaccatagatgtgtatgaggat
actcctgtgggcacaattattggatcagttactgcacaggacctagacgcaagcagcagt
gcagttaggtactctattgagtggaagaggcctgtggacagctgctttgatattgatact
gtggaagggaccatctccaccaacgagatgttggacagagagagtaataggcagcacaat
atctctgtagtggccactaaagttaacaaccctctcctatccaacaaggtcacagtcaca
gtcaatgtgctggatgtcaacgagttccctccggagcttgccgttccctttgacactttt
gtctgtgaaaatgcagaagtaggccaggtaattcagaccatcagtgctacggacaaggat
cttcctgctgttggacagaggttcttcttcaagtcccctagggaaatcagaaacaggaat
ttcaccgtgcgagactttggaaacaacactgcggggatagtgaccaagcatgtagggttc
cagaggcgggtccaggagtactacgtgatacctgtggtggtggaggacaatgggtatcca
gcccagagcagcaccggcaccctcactgtccgagtgtgtgcctgtgtgactgaagggtca
ctcctgtcctgcacggcagaggcagtcttcctaccaatgggcctcagcacctgggcagtg
atggccattttactgtgcatggtcatactcctggcgatctttgcactctatgtcggcctg
agacggcagaagaagagggagacgttgatgtcatccaaggaggacatccgggacaacgtg
atccactacgatgatgaggggggcggcgaggaggacacccacgccttcgacatgggcact
ctgaggaacaccaaagccaccaaggaaaaaatgctccgcaggggcacagggtcagaggtc
accgcccaaactgagatcaatgagtcaaccaccacagagggcagcgcagacatcatcagg
gactacatccaccagcgtctccaggagaaccacctgggtttctctgctccgccgtatgac
tcactggtcacgtatgcctacgagggggatgggtcggtgggcgagtcgctaagctccatc
gagtcgtcgatggcagacggaggagaagacttcaaatacctcagcgagtgggggccaccc
tttaaaactgtagcagggatattagacaaagacaaaacagatcctcccgcggcggaagtg
gaggagagccaagagtacttgtga
DBGET
integrated database retrieval system
