Oncorhynchus nerka (sockeye salmon): 115103078
Help
Entry
115103078 CDS
T07952
Name
(RefSeq) target of EGR1 protein 1-like
KO
K13202
target of EGR1 protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115103078
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115103078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf_CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
115103078
NCBI-ProteinID:
XP_029479555
LinkDB
All DBs
Position
LG20:54341944..54346323
Genome browser
AA seq
522 aa
AA seq
DB search
MCSNINQVAMTSSMVVPVIDVQNDNFKELWPAMVLAIKTASFIALDTELSGLGNRKALLA
ECIEDRYKAICNAARTRSILSLGFACYKKLENKDDDDTYLVQVYNLTLLCSEEYVIEPQS
VQFLVQHGFDFNKQYAEGVPYLRGNDRRVDAHGMNMRMLFVELLRARKPLVLHNGLIDMV
FLYQCFYAQLPDKLCTFTADLSQMFPAGIYDTKYATEYELRFAASYLEYAYKKCKLDNSK
SIEAGGGGRHLFLEFCKYSAPLSNYVDYRTCLAGFSPDGLLNVCQRFSAYGWCPNGSQCP
LSHDTDLIIQHDEKEKKKKRKRKRKNSSQGKVEGAPKSKQPHMELKQDQVIPDKDTKPPP
LTELVDGAQAQMPESDEKMKTKVEEDNGVREPQAVSADEEMKTDKEVERNGVSEPQPLAT
PDAEKKEESKRKKLEGGTHRAGFDAFMTGYIFSYAATLTERVGKPLSSESWLPECLNKVY
LSGKSVPMHIVKSTFSKSFKAHLHKMDVVWGKGVVSKVEGTV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcaaatattaaccaggtagctatgacatcctccatggtagtccctgttattgat
gtgcagaatgataatttcaaagaactgtggcctgctatggtccttgcaatcaagacggcc
tccttcattgcactggatacggaattgagtggccttggaaatagaaaagctttgctggca
gaatgcatagaggaccgttacaaagccatatgcaatgcagctcgcacacgctccattctc
tcccttgggtttgcttgttataagaaacttgaaaacaaggatgatgatgatacgtacctt
gtgcaggtgtacaacctgacattgctctgcagtgaggagtacgtaattgaaccacagtcc
gtgcagttcctggtgcaacatggatttgacttcaacaaacaatatgctgaaggtgtccct
tatctcaggggcaatgacaggagagtggatgcccatggaatgaacatgaggatgctgttt
gtggaactcctacgggctcgcaagcctttggtgctgcacaatggcttgattgacatggtg
ttcctttatcagtgcttctatgcccaactgccggataaactatgcacgttcactgctgac
ttgtcccagatgttccctgctgggatctatgacaccaagtacgctacagagtatgagctg
cgctttgctgcctcttacctggagtatgcctacaagaagtgcaaactggacaacagcaag
tcgattgaagctggtggtggtggacgccatctgttcctggagttctgcaaatactcagcg
cccctgagcaactatgtggactataggacctgtctagctgggtttagcccggatggactt
ctcaatgtctgccagcgcttctctgcttatggttggtgccccaatgggtcacagtgtccc
ttgtcacatgacactgacctcatcatccagcacgatgaaaaggaaaagaaaaagaaacgg
aagaggaaaagaaagaactcttctcaggggaaagttgaaggtgcccccaagagcaagcag
ccccatatggagctaaagcaggaccaggtgatccctgacaaagacaccaaaccgccccct
ctcacagagctggtagatggggctcaggcacagatgccagagagcgatgagaagatgaag
actaaggtggaggaagacaacggagtcagagagccacaggctgtgtctgcagatgaggaa
atgaagacagacaaagaggtggaaagaaatggagtgtcagagccacagcctctggccaca
ccggatgcagagaagaaagaagagtccaagaggaagaagctggagggaggtacccaccgg
gcagggtttgacgcattcatgacgggctacattttctcctatgctgccactttgacagag
agagttggtaagccactgagctcagagtcctggctcccagagtgcctgaacaaggtttac
ctcagtggcaagtctgtcccgatgcatatcgtcaagagcacattctccaagtccttcaag
gctcacttgcacaagatggatgtcgtgtgggggaagggtgtggttagcaaagtagaggga
acggtataa
DBGET
integrated database retrieval system
