Oncorhynchus nerka (sockeye salmon): 115103085
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Entry
115103085 CDS
T07952
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115103085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115103085
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115103085
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115103085
NCBI-ProteinID:
XP_029479562
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Position
LG20:54800283..54888835
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AA seq
650 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPTGINNTLANVTRSL
VTGAAEVAVEVVNKTKRTSPSEEYWKHYVLKISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIIRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVTCIPIYALYKISKSEGTTFLERLKNSCKADIKWGPALSEHRIG
HYAAPVSEAEVEVRPLKEELKEKEDEKRDEISLTIQGSNGSTAHNTTPSA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagctgaccagaatggagctgttccaggg
gaacccgtgaagacggataagaactccaggagagggaactgggggaaccagatagagttt
atcctcaccagcgtgggctatgctgtgggcctgggaaacgtatggaggttcccctacctc
tgctacagaaatggaggaggagccttcatgttcccctacttcataatgctggtgttctgt
gggatccctctgttcttcctggagctctccttcggacagttcgccagccagggatgcctg
ggggtctggaggatcagtcccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcatcgccttctactatttcttctcc
tccatgaccaacctgctgccatggacctactgcaacaacccctggaacacgcccacctgc
aacggcgtggtgacgcccacgggcatcaacaacaccctggccaatgtcacccgcagcctg
gtcaccggggccgctgaggtcgccgtggaggtggtcaataagaccaagaggaccagcccc
agcgaggagtactggaaacactatgtgctgaagatctcagacgacatcgggaatttcggg
gaagtccgtctccctattctgggatgtctggctgtgtcctgggtggtggtcttcctctgt
ctcatcagaggagtcaagtcttcaggaaaggtggtgtacttcacagcgacgttcccctat
gtggtgctgaccatcctgttcatcagaggcatcaccctggagggagctgtcaccggcatc
aagtactacctaaccccacagtggcataagatccttgacgctaaggtgtggggagacgct
gcctctcagatcttctactctctgggctgtgcatggggagggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagggacagcatcatcatcagcatcaccaactgt
gcaaccagcgtgtatgcaggcttcgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtggatgtatctgaggtggccgaccacggccccggcctggccttcgtggcctac
ccagaggccctcactctgctgcccatctcccccctctggtccctgctcttcttcttcatg
ctcatcctgctgggcctggggacgcagttctgcctgctggagaccctggtaacggccatc
gtggatgagatcggtactgactggatcattaggaacaaaacggtggtcacaggaggagtg
gctatagtgggcttcctgttgggggtgccgctcaccacacaggctgggatctactggcta
ctgctcatggataactacgctgctagtttctctctggttatcatctcctgcatcatgtgc
atctgcatcatgtacgtctatggacacaagaaatacttcaaggacgttgagatgatgctg
ggtttcccccctcccatcttcttccgcgtctgctggagatttgtgtcgcccatcatcata
tctttcatcctgatcttcacagtgatccagtacaagcccatcacctacaatgactacgtg
taccccggctggtccctagccatcggcttccttatggccatgtcctccgtcacatgtata
cccatctatgctctctacaagatctccaagtctgagggaacaacatttttggagcggttg
aagaattcatgcaaggcggacataaagtggggcccggccctgagtgagcaccggataggc
cactacgccgccccagtctcagaggcagaagtggaggtacgtcccctgaaagaggagctg
aaggagaaggaggatgagaagagggatgagatcagcctcaccatccagggcagcaacggc
tccacagcacacaacactacccccagcgcatag
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