Oncorhynchus nerka (sockeye salmon): 115103111
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Entry
115103111 CDS
T07952
Name
(RefSeq) laminin subunit gamma-2-like isoform X1
KO
K06246
laminin, gamma 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115103111
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115103111
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
CAP_N-CM
TACC_C
Motif
Other DBs
NCBI-GeneID:
115103111
NCBI-ProteinID:
XP_029479618
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Position
LG20:56640740..56654338
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AA seq
1150 aa
AA seq
DB search
MRILIYLIPIRFSVTMMSSWIFLCGLSLCTWSSIQGTYRYGGSDICKCNGKSRYCLPDSG
GLHCVDCQDNTEGRHCERCKEGFHHQRAGDSCVPCNCSSIGSVGAHCDSRGRCSCRAGTQ
GEKCDRCQNGTPISSNGCAANGGQLTDNSVTAQSLPCFCYGHSTECSTAKGYSVHTVTSN
FDDGPEGWRAATVHGVTPSQVHFRWSPTHHDIEVISKDILPVYLHAPDSYLGNQKLSYGQ
NLSFSLRLDRGNRHPSMADVVLEGSGLSVAASLGDLRTIVPSGQKITYTFRLDEQQGSEW
RPHLSSFQFQTLLHNLTDIKIRGTFGENGRGYLDDVRMESARRGAGSPAAWVQKCSCPVG
YEGQFCEKCAAGYKRSSPSKGPYSSCEPCSCRGGSCDSETGDCYSADETPGRQICPPGYY
NDPAQPQSCQKCPCPNGGACSVSPGSLEVKCDLCPPGTTGSHCHTCQDGFYGDPLGEDGI
QRPCRRCQCNGHMDPNTVRSCDPQTGQCLKCLKHTTGFFCESCLEGYHHSMPSEACKPCG
CNSQGSLYNKCSDQGQCSCREGFEGLKCQRSACPSCFNLVKTEMEGYSRKLREIETLFTG
MESGSLPVNDAQMEKAIRTAEDIVTDLQRNAQTLSESEKDLQARLSDISATQLSEGRDIQ
AISNTVDNIKLQDQKYQRQVSDVQTLISDVRRKLEEARFNIKQAEFPLGDAGVGTDTLSS
LVQRATDLAEKQQSKSETMDKTANGALAKSEKSLALMRSVMTGENKIKELISDLKTKYDE
NSAQVKAMESLATRLSSSARDESRMATGTLEQIASLEPGIPRPLKKDIDSVLAKLDGLRE
RVEKNLTAYQALQEDTQEDKAAVEDLLAQGKAAQQKYDKLLGRANHAKANTELALKDITD
NIDGVDNALEMLRGFDGQINKNKALADEAIKKLPGINATIHQAVGNNSETLFIIGSVTGD
YNDALGTVSSLEAVVSRLEGMSGSLPVPPAGLLKDATKLKEDVQGLQKQAVATVAKVAAE
KANAEIQKDRAAEASIGATGAYNNAKHTRDAVGETLLVINNLLSMIGKPGSVDEERLGEL
EQSITSARGQVNLQLQPRLQDLEGKEASQRTRLTGLNLDIDMILDDIRNLEDIHANIPKG
CFNSPPIERP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttgatctacttaattcccattcgattttctgtgacaatgatgagcagttgg
atatttctgtgtggactttctctttgtacctggtcgtctatccaaggaacctacagatat
ggaggatcagacatctgtaaatgcaatggaaagtcacgttattgcttgcctgactctggg
ggcctccattgtgtggactgccaagacaacactgagggaaggcattgtgagaggtgcaag
gagggattccaccaccagagggcaggagacagttgtgtgccgtgtaactgcagctctata
ggttctgtaggcgcacactgtgacagtagaggacgctgcagctgtagagcgggaacacag
ggggagaaatgtgaccggtgtcagaatggaacacctattagctcaaatggctgtgctgct
aatggtggccagctcactgacaactcagtgacagctcaatctctaccttgcttttgctat
ggacactcgactgagtgctccacagccaagggatactccgttcacacagtcacctcaaac
ttcgacgatgggccagaagggtggcgagctgccactgttcacggtgtgaccccgtctcaa
gtccacttccgctggtcccccactcatcatgacattgaggtcatctccaaagacatcctg
cctgtttacctccatgcacctgactcttacctgggtaaccagaagctgagctacggtcag
aacctgtccttctccctgaggctggaccgagggaatcgccatccgtccatggctgatgtg
gtgctggagggatctgggctgagcgtggcagcttccctgggagacctgaggaccatcgtt
cccagtggacagaagattacttacacattcagactggatgagcaacagggcagtgaatgg
aggccccacctttcatctttccagtttcaaacactcctccacaatctgactgacattaaa
atccgtgggacatttggagaaaatgggcgtggttaccttgacgacgtgcgcatggagtct
gcccgtcgaggtgccgggtccccagctgcatgggtacagaaatgtagctgcccagtggga
tatgagggccagttctgtgagaagtgtgctgcagggtataaaagaagttcgccaagcaaa
ggtccatacagctcctgtgagccctgcagctgtagaggaggaagctgtgactctgaaaca
ggagactgttactctgcagatgagacccctggtcgccagatctgcccgccagggtactat
aatgatcctgcccagccacagtcttgtcagaagtgtccctgtcccaatggaggtgcctgc
tctgtgagcccaggttccctggaggtcaagtgtgacctctgtccacctggcaccactggc
tcacattgccacacttgccaggatggtttctatggcgatcccttgggtgaagatggcatc
cagaggccttgtcggcgctgccagtgcaatggacacatggacccgaacactgtccgtagt
tgtgacccacagacagggcagtgcctgaaatgcctaaagcataccactggcttcttctgt
gagagctgtctggagggctatcaccacagcatgccatcagaggcatgcaaaccttgtggc
tgcaattctcagggctctctgtacaacaaatgcagtgaccagggccagtgttcttgcaga
gaaggctttgagggtctgaagtgccagcgttccgcgtgtccctcctgcttcaaccttgtc
aagactgagatggaggggtatagtcgtaaactacgggagatagaaaccctgtttacgggc
atggagagtggcagtctgccagttaacgacgcccagatggagaaagccatcagaacagca
gaggacatagtcacagacttgcagagaaatgcacagacactctctgaatccgagaaagac
ttacaggcccggctctcagacatcagtgcaacccagctgagtgaaggcagagacatccag
gcgatctccaacaccgttgacaacatcaagctgcaggaccagaagtaccaacgacaggta
tctgatgtccagacactcatcagtgatgtgcggcgcaaacttgaagaggcaagattcaac
atcaaacaagctgaattccccttaggtgatgcaggggtgggcacggacaccctctcttct
ctggttcagagagcaacagacctggctgaaaaacagcagagcaaatcggagacaatggac
aagacagctaacggtgcccttgcaaagtcagagaagtccctggcactcatgagatcggtc
atgacaggggaaaacaagatcaaggagcttatcagtgatcttaaaaccaagtatgatgag
aactcagcccaggtgaaggccatggagagcctggctactcgcctgagcagctctgcccga
gatgagagcaggatggcaactggcactctggagcagatagcttccctggagccgggaatc
cctcgtcctctcaagaaggacattgacagtgtgttggctaaattggatggcctgagagaa
cgggtggagaagaacctaacagcgtaccaggcactgcaagaggacacccaggaggacaaa
gccgcagtagaagatcttctggcccaggggaaggcagctcaacagaaatatgacaagctt
cttggcagagcaaatcatgcgaaggctaacacagaactggccctgaaggatatcacagat
aatattgatggggtggataatgcactggagatgctaagagggtttgatggccagatcaac
aagaacaaggcattggccgacgaggccataaagaaactccctggcatcaacgccaccatt
catcaagctgttggcaacaactcagagaccctattcatcataggcagtgtgactggagac
tacaatgatgcactgggcactgtcagcagcctggaagctgtggtctctcgactggaggga
atgtctggctctttaccagttcctcctgctggtctgttgaaggacgccaccaagctgaaa
gaggatgtgcagggtctgcagaagcaggcagtggccactgtggccaaagtggccgcagag
aaggctaacgctgagatacagaaagacagagcagcagaggcttcaattggagcaactggt
gcttacaacaatgccaagcacaccagagacgctgtgggagaaacactcctggtcatcaat
aaccttctgagcatgatcggtaaacctggcagtgtggatgaggagaggctaggggagttg
gagcagtccatcaccagcgctcgtggccaggtcaacctacagctccagcctcgactgcag
gacctagaagggaaggaggccagccagaggaccaggttgactggcctcaacctagatatc
gatatgatcctggacgacatcaggaacttagaggacatacacgcgaacatccctaagggc
tgcttcaattccccacctattgagagaccttaa
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