Oncorhynchus nerka (sockeye salmon): 115103125
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Entry
115103125 CDS
T07952
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115103125
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115103125
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115103125
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C64
115103125
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
115103125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
115103125
NCBI-ProteinID:
XP_029479643
LinkDB
All DBs
Position
LG20:complement(56894755..56902051)
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AA seq
1190 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEHEHVSTVGYGKDRSGSLIYLHDTLEEIKKANSNKECIIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIRKYIH
LEQDGSCVIAGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGMIGVQP
EEVTEAARKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPEKDILIPDYKLSTLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVEVTLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVEIQQAVDTQP
PTKIILTGQKSKTIHKEELTMSKAERSLQQSISEQALVTQKRRTDRLKQEQKGVQGHGRP
SSPSATQEPSSSAPATPTKSSFSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIA
NEFIVSPAQQCIRHGFPPKELLPPKDGEENEPVALQHGDRVTVEILRGPEDHKVSTPSAS
SSHSALHSLHSVKSDDTVTSSRMNNSRELQENIDLEMSSLCLLATLMGEDVWSYAKKLPH
LFQQGGVFFNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEECLELCVDAAGHFPVGPDVE
DLVKEALVQLRSEAASRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPG
GSPPEHKPITRQHSSGVDLSASVSKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPSM
IEEQRKKLQEMVSSIQASMDRHLREQSNAGAGTGGPAERTSGAKMSASQSTPGVGEQEAS
SMDVSTAGAHGTPVKAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacaaggctcaaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggctcgatcagcattgaatgc
actgaatgtggccaacgccacgaacagaataatcttttaaacgtggaagaagtaactgat
ccagacgttgtactgcacaatttgttaagaaatgccctactcggtgtcactggagcccca
aagaagggaaccgagctggtgaaagtgatggggctttccaactaccattgcaagctcctc
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgagg
gaaatgaatcaaggagagatgttcgactgctcacttctaggtgatcgggcgtttctaatc
gaacatgagcatgtatctacagttggctatggcaaggacagatccgggagcctgatatac
ctccacgacactttggaggagattaagaaagctaacagcaacaaagaatgcataatacct
gttcatgtggatggagatggacattgccttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttaagagagaatttgaaacagaatttcaagcaaaatctg
gatcgctacaaggcactctttcaggattttattgatgcagctgaatgggaagacatcatc
aacgaatgtgaccccctttttatcccaccggagggtgtgccactgggacttcgaaacatt
cacatatttggcttggctaatgtgctgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaacttttctccctgggcttgtaccggaagag
cagtgcaagggaaaagatgggaagttcaacaagcctatatgtatcgcctggagtagctca
gggcgtaaccactacatccctcttgtcggaataaaaaataccctcctccccaagctgccg
cccaggcttctccccaaagcttggggggtcccacaggagctcatcaggaagtacattcat
ttggaacaagacgggagctgcgtcatcgcgggagaccggagcttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaagcatggaatccacccctcc
ctggtggcagacgtgcatcagtacgtttacagacggaccggtatgatcggcgtccagccc
gaagaggtgacggaggctgccaggaaatcagtcatggaaaaccggcttcatcgctgtctg
atctgcaatgcactctctgagcttcatgttttacctgagtggctggctccaggtggtaag
ctctacaacctggctaaatccacccacgggcagctcagacccgacaagaactacagcttt
ccgttgaacaatgtggtctgctcttacgacccagagaaagacatcctcattcctgactac
aaactaagcaccttgaacacctgcaactggtgccacggcacctcagtgcgccacatccat
ggcaacggctctgtggtgtacttagatggagacagaaccaacacccgctcccagggggga
aagtgcggctgcggcttcaagcactactgggagggaaaggagtatgacaatctgccagag
gctttccccatcactctggagtggggtgggcgtgtcgtgcgggagacagtgtactggttc
cagtatgaggttgaggtgaccctgaacagcaacgtctatgatgttgccatgaaactggtt
accaagcatttccctggggagtttgggagtgagctcctagtgcagaaagtggtgaacacc
attttgcatcacactgccaagaagaacccagacgagtataacccagtctccattgacggt
gcgcatgctcagagactcacagacgtggtggaaatccagcaggccgttgacacacagcca
ccgactaagatcatactaactggacagaaatcaaagaccattcacaaagaggagctgacc
atgagtaaagcagagcggagccttcagcagagcatcagcgaacaggccctagtgacccag
aaaaggaggacagatcgactgaagcaggagcagaagggagtccagggacatgggcggccg
tcctctccgagtgctactcaggaaccttcctcatctgctccagccacgcccaccaaatct
tccttctctcccacttccagtaaggagaagaagatccgtgtcaccactagcgacgggcgg
caggccatgctcactttacaggctcaaaccaccttttctgagctccagaggagcattgcg
aacgagttcattgtgtctccagcccagcaatgtattcgacatgggtttccccccaaagaa
cttttacctcccaaggatggagaggagaatgagcctgtggctctccaacatggggacagg
gtgactgtggagatcctgagaggtccagaggatcacaaggtttccaccccaagtgcttcc
agttcccattcagccctgcattcactccactctgtgaagagtgatgatacagtgacttcc
agcagaatgaataatagcagagagctgcaggagaacattgaccttgagatgtcctccctc
tgtctcctagcaaccttaatgggagaagatgtctggtcatatgcaaaaaaactgcctcac
ttattccagcaaggtggagttttcttcaacattgtgaagaaagatatgggcctgatggat
ggcaagcactgcaccctcccacacttgactggaaagacgtttgtgtacaacgcagcagag
gagtgtctggagctgtgtgtggatgcagcgggacacttcccagtgggccctgacgtggag
gacctcgtcaaggaggccctggtgcagctccgctctgaggctgcctccaggagtcgggag
ggaagtccctctcacagcctgctgaggctcggaagtggaggtgtggtgcgcaagaaggag
cagctccagagtgtcaacgccttccagggtaagggccactccctgggcagcgccccaggc
ggctctccccctgaacacaagcccatcacccgccagcacagcagcggggtggacctgagc
gccagcgtctcaaagggacctgacctctctgacatctcagaagatgcaaccaaggagctg
gtgcgcatggctcctggtttcgtcaccatgaaagacagccgacacctggaccctagtatg
atcgaagaacagaggaaaaaactacaggagatggtctcatccatccaagcctccatggac
aggcacctgagggagcagagcaatgcaggggcaggcactgggggccctgcagagaggaca
agtggggctaagatgagtgcttcccaatctaccccaggggtaggtgaacaggaagcctct
tctatggacgtatctactgctggtgctcatggcacaccagtgaaggcagggaacaagcct
gatggaaaggatgcagggtcagaggagctggaggaaatggatagccaggatgcagagcat
accaacgccctggagccgatggatcattcctga
DBGET
integrated database retrieval system
