Oncorhynchus nerka (sockeye salmon): 115103145
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Entry
115103145 CDS
T07952
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
one04517
IgSF CAM signaling
one04520
Adherens junction
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115103145
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115103145
09144 Cellular community - eukaryotes
04520 Adherens junction
115103145
04530 Tight junction
115103145
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115103145
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115103145
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115103145
NCBI-ProteinID:
XP_029479707
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All DBs
Position
LG20:58354019..58601656
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AA seq
1403 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKIHILIQQAVMRYKKAIAKDASYWLLVHRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQEPHHGGDGTSASSTGTQSPDLYATELNTSSMSAFQPYQ
AASEIEVTPSALRTNMPLHVRRSSDPALATVNGPFSDPRVTLPPEEPSRKNPTRWSTTAG
FLKPRHSVGDTSTEANSLERKGKVVDTYRSLPRDSGTWANEREFQRETARSSLSANHPMV
DRWLERQEQEEGGHGEEENGRIEPVGRADSCMAHTPVRSLDLIFSDIVKLVEVSNDGGPL
GIHVVPFSAQDRRTLGLLVKRLERGGKAEQHSLFQENDCIVRINNGDLRNIRFEQAQSMF
RQAMRSPVIMFHVVPNLMKAQYEQLSHSERNPDVAYSSGSFSPDSLASERGSTTSGLDHT
PQRMSRGPHPHQHPEQGDAYTSLPHPHVLAHGGSMGKPPLGHAPPGRTPSPHRVLNSTPT
AGFTKKVGRRLNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGHLKAGD
RLLEVNGVDLVGLTQEEVVCLLRATPMGGAVGLVVLRQEETFLPREVNAEPQMQSPRDLK
IEEDDLVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHSDLGIFVKSIINGGAA
CKDGRLRVNDQLIAVNGESLLGKTNQEAMETLRKSMSVEGNKRGMIQLIVARRVTKRNEL
EASGSPLGPEQTLNSTLLDDRERRISHSLYGGIEGLDDNLMPRQTLMGRMMGNYQLSPTV
NMPQDDTVIIEDDRLPVLPTHLSDQSSSSSHDDVGVPPPWAKEIQIQNESPLSPDDTDPD
GAFQREGFGRQSMSEKRTKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTR
DVGPFLGLKKSSSLESLQTAVAEVTLNGGMPFHRPRPRIIRGRGCNESFRAAIDKSYDRP
AATEDDDEDMETLEEDTEESSRSGRDSVSTVADLTPLPNTERPLVNGNRTDEDEKDKGGN
DKKKQKDKEKDSKNKAKKGMLKGLGDMFRFGKHRKDGEKIERKGSSKWRPEELQASEEET
LRMRLEQERIQLKTRELRERQARERDYAEILDINLSRDEEHPYAGIGPLDTSLGSGHSRP
QSPRDNDHHHQDSLYTQVGKARNTNGRPPSADSNRLAPSNHDRIQRLRHEFQQAREDDDP
DDRRRTYSFEQPWQNTTNTGPSPYQTDRQQTGRHSVSVEMQMQRQRQEERDAFQQAQRQY
SSLPRQPRKNPSSISQDSWVKVYPPGEGFQTTKENPRYSSYKGSRNGSPGVSSVNARVLL
EAQELLRQEQRRREQKAKGKQLQLAPPQEHHGNNTYNATPSYSAHMDPVSPKGPYRQDVP
PSPSQLARLNRLQGPEKGRPFYS
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactgtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaaatccatattctcatccagcaagccgtcatgagatacaaaaaagcaattgcaaag
gatgccagctactggttacttgtgcaccggttggagcatggggacggaggtatcctggac
ctggatgacgtgctgtgtgatgtggctgatgacaaagaccggctggtggcggtgtatgat
gaacaggaacctcaccatggtggtgacggaaccagcgccagctcaacgggcacccagagt
cccgacctgtatgccaccgagctcaacacaagcagcatgtctgctttccagccctaccag
gccgccagcgagatagaagtcactccgtccgccctccgaactaatatgcccctccatgtg
cgtcgcagcagtgatccagcactggcgacggtcaatgggccattcagcgacccccgtgtg
accctgccgccagaggagccgtccaggaagaaccccacccgctggtccaccacagctggt
ttcctcaaaccacgacactctgttggcgacaccagcactgaagccaacagcctggagaga
aagggtaaggttgtggacacgtaccgtagtctcccccgtgactcagggacctgggcaaac
gagagagagttccagagagagacggcccgctcctccctgagcgccaaccaccccatggta
gaccgctggctggagagacaggagcaggaggagggggggcacggggaggaggagaacggc
aggatcgagccggttggccgagctgactcctgtatggcccacacccctgtgaggtcactg
gatctaatcttcagtgacattgtaaagctggtagaagtgtccaatgacggcgggcccttg
gggatccatgtagtgcctttcagtgcccaggaccgcaggactctcggcttgttggtcaag
cgcctggagaggggaggcaaggcagagcaacatagtctgttccaggagaatgactgcatc
gtacgcattaataatggagacctgcgaaacatccgcttcgaacaagcccagagcatgttc
cgccaggccatgcgttcaccagtcatcatgttccatgtggttcccaacctgatgaaggcc
cagtacgagcagctgtcacacagcgagaggaaccccgacgtggcctactcctctggaagc
ttcagccctgactccctagccagcgagagaggcagcacaacctcaggcctggaccacacc
ccacagaggatgtcccgtggtccccaccctcaccagcaccccgagcagggtgacgcctac
acctctctacctcacccccatgtgcttgcccatgggggctccatgggcaagcccccatta
ggccacgcccctccaggccgcaccccctcccctcacagggtgctaaactccacccccact
gcaggcttcaccaaaaaggtcggcaggagactgaacatccagctgaaaaaaggtccggag
ggtctgggtttcagcatcacatcgcgtgacgtccccatcggcggctcggcgcccatctac
gtgaagaacatcctgccccgaggagctgccatccaggacggacacctcaaggctggagac
aggctgctggaggtgaacggagtggacctggttgggttgacccaggaggaggtggtctgt
ctgctgagggccacgcccatgggaggggctgtggggcttgtggtgttacgacaggaggag
accttcctgcccagagaagtgaatgcagaaccccagatgcaaagccccagagatttgaag
attgaggaggatgacctggtgttgaccccggatggtaccagggagttcctgacctttgag
atccctctgagtgactccgggtcggcggggttaggggtcagcgtcaagggcaaccgctcc
aaggagaaccactctgacctgggcatctttgtcaagtccatcatcaacgggggagctgcc
tgcaaggatggaaggctgcgggtcaacgaccagctgatagcggtgaacggggagtcgttg
ctaggcaagaccaaccaggaagccatggagacgctaaggaagtccatgtcggtagagggc
aacaagcgggggatgattcagctgattgtggccaggagggtcactaaacgcaacgagttg
gaggcctctgggagccccctgggaccggagcagaccctcaactccaccctgctggatgac
cgggagcgtcggatctcccactctctgtacggaggcatagagggcctggacgacaacctg
atgccacggcagacactaatgggccgaatgatgggtaactaccagctctcccctacagtc
aacatgccccaggacgacacagtcatcatcgaagacgataggctgccagtacttcctacc
catctctctgaccaatcgtcttccagctcacatgacgacgtgggtgtccctcccccctgg
gccaaagagattcaaattcagaatgagagccctctgagccctgatgacaccgacccagac
ggagcctttcagagggagggcttcggcagacagagcatgtctgagaaacggacaaagcag
tttggagatgccagtcagctggagatcatcaagacacgcaagtccaagagcatggatcta
gtagccgacgagattaacctcacccctcgcaaagagaacacaccagggtcttccaccagg
gacgtgggtcctttcttaggcctcaagaagtccagctctctagagagtttacagacagcc
gttgccgaggtaacgctgaacggtggcatgcccttccacaggccacgcccacgcatcatc
agggggcggggctgcaatgagagcttccgggctgccatcgacaagtcatacgacaggcca
gccgctacagaggatgacgatgaggacatggagacattggaggaggacaccgaggagagc
tctcggtccgggcgcgactctgtgtccaccgtggcagatctgacgccactgcctaacacc
gagagaccgctggtcaacggcaaccgcaccgatgaagacgagaaggacaagggagggaat
gacaaaaagaaacagaaggacaaagagaaggacagcaagaacaaggctaagaaaggcatg
ctgaaaggcctgggagacatgttcaggtttggtaaacatcgtaaggacggagagaaaatt
gagcgtaaagggtcaagcaagtggaggccggaagagctgcaagcctcagaggaagaaaca
ctgaggatgagactggagcaggagaggatccagcttaagacccgggagctgcgggagcgg
caggcacgggagagggactacgctgagatcctggacatcaacctgagccgagacgaggag
cacccctatgccggcatcgggcccctggacacgtccctgggcagcggacacagccgtccc
cagagcccccgagacaacgaccaccaccaccaagactccctctacacacaagtcggcaag
gcccgcaacacaaacggacgccctccctccgccgacagcaacagactagcgcctagcaac
cacgaccggatacagcggctgaggcatgagttccagcaggccagggaggacgatgaccca
gacgaccggagacgcacctatagcttcgagcagccctggcagaacaccaccaacaccggt
ccaagcccgtaccagacagacagacaacagacaggccgacactctgtgtctgtagagatg
cagatgcagagacagaggcaggaggagagagacgccttccaacaggcgcagagacagtac
agctctctgccacgacaacccaggaagaaccctagctccatctctcaggactcctgggtc
aaggtctacccgccgggcgagggcttccagacgaccaaggagaaccctcgctactccagc
tacaagggctccaggaacggctccccgggggtgagcagtgtgaatgcccgcgtcttgctg
gaggcccaggagctgctgaggcaggagcagagacgcagggagcagaaggccaaagggaag
cagctacaactagcacccccgcaggagcaccacgggaacaacacctacaatgccactccg
tcatactcagctcacatggaccctgtgtcgcctaagggcccctatagacaggacgtaccc
ccctcgccctcccagctggccaggctcaacaggctgcaggggcctgagaaggggaggccc
ttctactcctga
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