Oncorhynchus nerka (sockeye salmon): 115103148
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Entry
115103148 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115103148
00071 Fatty acid degradation
115103148
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115103148
09143 Cell growth and death
04216 Ferroptosis
115103148
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115103148
03320 PPAR signaling pathway
115103148
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115103148
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115103148
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115103148
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115103148
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115103148
Exosomal proteins of breast cancer cells
115103148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115103148
NCBI-ProteinID:
XP_029479719
LinkDB
All DBs
Position
LG20:complement(58890185..58907518)
Genome browser
AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVCSFITFLPWYFLSGAGTNLDRARRVKARSVSGRPAGPYR
ATNQAGGIHQKLVWSLHLGVDTLDKVMVHGATRFPERDCLGTREVLNEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKAILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNLVAVQELGSRPDNMAVARRQPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGITGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCRIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQMTKGYR
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLVCSEITLKDWEEGGYYSTDKPNPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGELHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLTVLAEQRGLRGSWEEICNNPDMERDVLRIITEA
ALSAKLERFEIPKKICLSAEPWTPETGLVTDAFKLKRKELKSHYQDDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagaggacatgaacccgctgctgctgcaagtcttccgctcagtggtctgg
gtctgctctttcattaccttcctgccatggtacttcctctcgggtgccggcaccaaccta
gaccgggcacggcgggtcaaggcgcggtcggtgagtgggcgtccagcgggcccttaccgg
gcgaccaaccaagcgggcggtatccatcagaagctggtgtggtccttgcacctgggggtg
gacaccctggacaaggtgatggtgcacggggcgaccaggttcccagagagggactgcctg
ggcaccagagaggtgttgaacgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggttatcctaggggagtatcagtggatgtcgtacgaggagacctaccaggcagcagtg
tgttttggcagtggtctggctgcgctgggccagaggcctcagtgtaacatcgccattttc
tgtgagaccagggctgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccatcgcccacggtctcaatgaaaca
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggcgatcctg
ttagaggtgcctcggctgcagcacattatcgtggtggacagtaagccaaccagctggcct
ggctttccccgcggcatcatggtccacaacttggtcgccgtgcaggagctgggctctcga
cccgacaacatggcggtggcacgccggcagcccctgccctctgacatcgctgtcatcatg
tacaccagcggctccaccggcatccccaagggtgtgatgatctcccatagcaacatcatc
gcgggcatcacgggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctaccgctggctcatgttctggagctcagtgcagagatggtgtgtatctctcac
ggctgccgcatcggatactcctccccacagacgctagcagaccagtcgacaaagattaag
aagggcagtaaaggagacaccagtgttctgaagcctacactcatggctgctgtacctgaa
atcatggatcgcatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctgtttgtgttggcctacaactataagatggaacagatgaccaagggctacagg
accccgctctgtgacagtctggtgtttaggaaggtgcgctcgttgttaggaggtcacatg
cgggtgctgttgtcgggcggcgcgcccctttctgccgccacacagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcactgagacctgcggagctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggagctcctctggtctgctctgag
atcaccctcaaggactgggaagagggcggttactacagcacagacaagcccaacccaaga
ggtgagattgtgatcggcgggcccaatgtgaccatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaacggccagcgctggttctgtacgggagacatc
ggggagctccaccctgacggctgcctcaagatcatcgaccgtaagaaggacctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgtgcttacgctaacagtgaccagtcatatgtgattggctttgtg
gtgcctaatcaaaagcagctgacagtgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggaaagagacgtcctccgcattatcaccgaggcc
gccctgtcagccaaacttgagcgctttgagatccctaagaagatttgtcttagtgcagag
ccctggaccccagagactggcctggttacggacgcattcaaactcaaacgtaaggagctc
aaatcacattaccaggatgacatcgaaaggatgtacggtggcaagtaa
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