Oncorhynchus nerka (sockeye salmon): 115103239
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Entry
115103239 CDS
T07952
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03010
Ribosome
one04120
Ubiquitin mediated proteolysis
one04137
Mitophagy - animal
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
115103239
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115103239
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115103239
04137 Mitophagy - animal
115103239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
one03011
]
115103239
04121 Ubiquitin system [BR:
one04121
]
115103239
Ribosome [BR:
one03011
]
Ribosomal proteins
Eukaryotes
Large subunit
115103239
Archaea
115103239
Ubiquitin system [BR:
one04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
115103239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
115103239
NCBI-ProteinID:
XP_029479908
LinkDB
All DBs
Position
LG20:63512426..63515827
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacgttgacgggtaaaaccatcacccttgaggtggaacccagt
gacaccatcgagaatgtgaaggccaagattcaagacaaagaaggtattcctcctgaccaa
cagcgactcatcttcgctggcaaacagttggaggatggccgcacattgtcagactacaac
attcagaaagagtccactctacatctcgtgctacgtctgagaggaggtatcatcgagcct
tccctgagacagctggcacagaaatacaactgtgacaaaatgatctgccgcaaatgctat
gcacgtcttcacccccgtgcagtcaactgccgcaaaaagaagtgtgggcataccagcaac
ctgcgccccaagaagaagctgaagtaa
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