Oncorhynchus nerka (sockeye salmon): 115103261
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Entry
115103261 CDS
T07952
Name
(RefSeq) occludin-like isoform X1
KO
K06088
occludin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03272
Virion - Hepatitis viruses
one04514
Cell adhesion molecules
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115103261
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115103261
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115103261
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115103261
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115103261
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
FadA
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
115103261
NCBI-ProteinID:
XP_029479946
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Position
LG20:64178490..64203707
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AA seq
544 aa
AA seq
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MYEPRHYDNPPIYSPPYTATSNGFYTHRSVHSPRSNFDPYPPPPDSFYMEDRPQHFYKWF
SAPGLVKTMEGATVILCFLIFACVASTLVWDMHGAGIGMGGYGTGSMGIGSGTGGYYGGS
YGYSSSYMTPYSAKSAMISMAAINFLVSLGFLVGSFSRSPAMRGRRFYLTVLVCDVVLAV
LQGIIDIVFVIGVNPMSQSSQSMLYNPMLMMCQNMQGSPSLSGSVGAGFPGGFPMYNQYL
QHYCYMDPEEAVALVLGFLVVVALCVAAYYAYKTRSKIWRHGKPNIIWDRPLLRPPERND
VQDWVDYVAEGQSTQRAPTVILSEKTVPDLRTENGVVSDGAGTVSIYSEETYNGNVYYDN
TNGRVPEPLYRHTRVSSSPSVEAESLKKYPIHRERERDPTPPSQEETQCETGYTTGGDTG
NELDQDQSDHMHSMHPEITSDRQRRQYKKEFDSDLASYKSLCAEMDDISEQMHKLSRELD
TLEEGTAKHQGVADEYNLLKGLKQCVISPLQTADYQAKKQRSKDLRQNLFHIKRLVKNYD
NGLC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagccgcggcactatgacaacccacccatctatagtcctccctacactgctacc
tccaatggattctacacccaccgaagtgtgcactccccaaggagcaactttgacccctac
cctcctccccctgactcattctatatggaagataggcctcaacacttctacaaatggttc
tctgctcctgggcttgtcaaaacaatggaaggagcaacagtcatcttgtgtttcctcatt
tttgcctgtgtagcctccacgttggtctgggacatgcacggagcaggaataggaatgggg
ggctatggaacagggtctatggggattggcagtggcactggtggctattacggaggcagc
tatggctattccagctcctacatgaccccgtattcggccaagtcagccatgatatccatg
gcggccattaacttcctggtttctctgggattccttgtggggagtttttctcggtcgcct
gctatgcgtggtcggaggttttacctgacagtgttagtctgtgacgttgtcctggcggtg
ctgcagggcatcattgacattgtgtttgtgatcggtgtcaaccccatgtcgcagagctct
cagagcatgctctataaccccatgcttatgatgtgccagaacatgcagggaagccccagt
ctgagtgggagtgtgggagcggggttccctgggggtttccccatgtacaaccagtatctc
caacactactgttacatggaccctgaagaggctgtggcattggtgcttgggttcttagta
gtggtggcactgtgtgtagctgcatactacgcctacaaaacccgcagtaagatctggcgc
cacggcaaacccaacattatctgggaccgacctctgctcagaccacctgaacgaaatgat
gtacaggactgggtggactatgttgcagaggggcagagcactcagcgggcccctactgtg
atcttatcagagaagaccgtccctgacctcaggacagagaacggtgttgtctcagacgga
gccggaacagtcagcatctacagtgaggagacctacaatggcaatgtttactatgacaac
accaatgggcgtgtgcctgagcccctgtaccggcataccagggtcagctccagcccctct
gtggaggcagagagcctgaagaagtaccccattcacagggaaagggaacgggatcctacc
cccccttcccaggaggagacccagtgtgagaccggctacaccactggtggggatactggt
aatgaactggaccaagaccaaagtgaccacatgcatagcatgcaccctgagataacatca
gacaggcaacggcgacagtataagaaagagtttgactccgacctggcgagctacaaaagc
ctgtgtgccgagatggatgacatcagtgaacagatgcacaagctgagccgagagctggat
accctggaggaggggactgcgaagcaccagggagtagctgatgaatacaaccttctcaag
ggcctgaagcagtgtgttatttctcctctgcagacagcagactatcaagccaagaagcag
cgaagcaaagacctgagacagaacctattccacatcaagcgcctagtgaagaactatgac
aatggcctttgttga
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