KEGG   Oncorhynchus nerka (sockeye salmon): 115103267
Entry
115103267         CDS       T07952                                 
Name
(RefSeq) lysine-specific demethylase 4A-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115103267
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     115103267
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     115103267
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115103267
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5
Other DBs
NCBI-GeneID: 115103267
NCBI-ProteinID: XP_029479957
LinkDB
Position
LG20:64282275..64313423
AA seq 1172 aa
MSSDSGSQTPGSKGIMTFHPTAEEFQNFSRYIAYMEYQGAHQAGLAKVVPPKDWRPRKSY
DDIDDLVIPAPIQQVVTGQSGLFTQSNIQKKPMTVREFRKTANSDKFCSPRYADIEELER
KYWKSVTFNSPIYGADVNGTLYDPDVTDWNIGKLNTILDTVEHANGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGASKSWYCVPPEQGKKMERLAQGFFPGSHQNCEAFLR
HKMTLISPSILRKYGIPFEKITQEPGEFMVTFPYSYHAGFNHGFNCAESTNFATERWIEY
GKQAMLCTCRKDTVKISMDLFVKKYQPDRYEQWLAGRDTGPIDHSRPTPEAKEFLGEEQG
KDCISQEPEVERKSPTLRIGTKRHWVCLDVPDKVVPKDEEEEYDKKARLGLTALGTGAEN
CTDTDTPVKLTSRELPNLKTDPTKGNSSTSPAPQKVTIPSTSNHAATILAQPQSHRNGHL
PVVAPPARTGPSAQPVRKLGVASLLFHKTQSPKETMQVHSYARENQQPIHHTQLHVHSYA
REHLPRHLQPHLQLKAQLQSQVKAGQQESQVPFTKDEHIQAEAQSPRKGEQVETKAQTQG
LRKWQQPGEAQAREEKSEAKAPSSPEPVQTNAHTRPTKRAEVKRDRWKQCLSPVQAELTL
IKQTNLNLSKPMILHPSKLTNLSPSKQTNCKSVKSKQYPLLRQLPKQHPLLSSSESHSDN
DELYVDMKDEPEEREEWAKPLAQLWQSRPYNPQAERSYNQRMGLQAPYCSICLLFHTYDQ
SQPSSNPSYTVKGRRGGRQRSKPLIPEMCFSTTSDKTNSSSSSGEGQLYTPHLEEDGTSL
LVSCSQCCVRVHASCYGVSVDQVSDDWMCARCEANALTEDCCLCSLRGGALQRANNDKWV
HVLCSLVVLEARFVSIADRSPVDLSYIPLARFQLKCFYCKRRVKRDVGCCVQCSHGRCTT
AFHPTCAQAAGQLMQPDDWPFIVHVTCYRHKSPVLPERNKAAMQELEVGQQVICKHKNGR
YYQCEVLELLTTATFYEVVFDDGSYSDNLLPEDIENRDCVKLGPPAVGDVVQVRWTDNLL
YGAKFVASHSILMYQMEFEDGSSLSAKREDVYSLDEELPKRVKSRMSKASDMRFDGIFTE
EEVKQGSKRQRVINSRYREDYIEPLLYRVMME
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgtcgtctgattcggggtcccagactcctggctccaaggggatcatgacctttcacccc
actgctgaggagttccagaacttcagccgctacattgcctacatggagtatcagggagca
catcaagccggcttggctaaagtcgtgccaccaaaggattggaggcccaggaagtcctat
gacgatatagatgacctggtgatcccagctcccatccagcaggtagtgacgggccagtca
ggcctgtttacccagtccaacatccagaagaagcccatgaccgtccgagagttccgtaag
acggccaacagtgacaagttctgcagtcctcgctacgccgacattgaggagctggagagg
aagtactggaagagcgtgacctttaactcgcccatctacggtgcagatgtgaacggaaca
ctttacgaccctgatgtgactgattggaatatcggcaaactgaacaccatcctggacacg
gtggagcatgcgaatggcatcaccatcgagggggtgaacacgccctacctgtactttggc
atgtggaagaccaccttcgcctggcacactgaagacatggatctctacagtatcaactac
ctccactttggagcgtccaagtcctggtactgtgttcctccagagcaggggaaaaaaatg
gagcgtttggctcaagggttttttcctggtagccaccaaaattgcgaagccttcctgagg
cacaagatgaccctcatctcgccctccatattaaggaaatatggcattccatttgagaag
atcactcaggagcccggtgagttcatggtgacatttccctatagctaccatgccggattc
aaccatggcttcaactgtgccgagtccaccaactttgccaccgaaaggtggattgagtat
ggaaagcaagccatgctgtgtacgtgcaggaaggacactgtgaagatctccatggatctg
ttcgtgaagaagtaccagccagaccgctacgagcagtggctcgcgggacgggacacgggc
cccatcgaccactcacggcccaccccagaggccaaggagttcctgggggaggagcagggg
aaagactgcatttcccaggagccagaggtggagagaaagagcccaacactgaggataggg
accaagaggcactgggtgtgtctggatgtacctgacaaggtggtccctaaagatgaagaa
gaggagtatgacaagaaggccagactaggcctcaccgctctgggcacgggagcagagaac
tgcacagatacagacacaccagtgaagctcacctcgagggaactgcctaatttaaagacg
gaccctacgaagggcaacagcagcacaagcccggctccacaaaaagttaccatcccctcc
accagcaatcacgcagcgaccattttggctcaaccccagtcgcacagaaacggccacctc
ccagtagtggctcccccggccaggaccggtccttccgctcagcctgtccgaaagctgggg
gtggccagcctcctcttccacaagacccagagccccaaggagaccatgcaggtccacagc
tacgcccgtgagaaccagcagccgattcaccacacccagctccacgtgcacagttatgcc
agggagcacctgccacggcacctccaaccccaccttcaactcaaggcccagctccagtcc
caagtcaaagccgggcagcaggagtcccaggtcccattcaccaaagatgagcatatccag
gctgaagcacagagtcccagaaagggagaacaggttgaaacaaaggcccagacccaaggc
ctcagaaagtggcagcagccaggcgaggcccaggctcgggaggagaagtccgaagctaag
gcccctagcagcccggagcctgtccaaaccaacgcacataccaggccaaccaagagggca
gaggtcaagagggacaggtggaagcaatgtctttccccagtgcaggcggagttaacgtta
atcaagcagacaaacttaaacttaagtaagccgatgattttacatccaagtaaactgact
aacttaagtccaagtaagcagacgaactgcaagagcgtgaagagcaaacaatatcctctc
ctccgccagctgcccaaacagcacccactcctcagctccagtgaaagccacagtgataat
gatgagctgtatgttgatatgaaggatgaaccagaggagagggaggagtgggccaagccc
ctggcccagctgtggcagagccgaccttacaacccccaggcggagagatcgtacaaccag
cgcatgggcctgcaggccccctactgctccatctgcctgctcttccacacatacgaccag
tcgcagccgagcagcaatcccagctacactgtaaaaggccggcgcgggggcagacagagg
tccaagcccctgatcccggagatgtgtttcagcaccaccagtgacaagaccaacagcagc
agcagcagcggcgagggccaactctacacccctcacctggaggaggacggcaccagcctg
ctggtcagctgttcccagtgctgcgtccgcgtccacgccagttgctatggagtgtctgtt
gaccaagtgtcagacgattggatgtgtgctcgctgtgaagccaacgctttgactgaggac
tgctgcctgtgttcactgcgagggggagctctacagagagccaacaacgacaagtgggtg
cacgtgctgtgttcgctcgtggtcctggaggcgcgcttcgtgagcatcgccgaccgcagt
cccgtggacctcagttacatccctctggccaggttccagctgaagtgtttctactgtaag
cgccgggtgaagagggatgttggctgctgtgttcagtgttcccatggccgctgcaccact
gccttccaccccacctgcgcccaggctgctggccagctcatgcagcctgacgactggccc
ttcatcgtccacgtcacctgctacaggcacaagtcacccgtcctaccagagcgtaataag
gcggccatgcaagagcttgaggtcggccagcaggttatctgtaagcataaaaatgggcgc
tactaccagtgtgaggtgctggagctgctgaccaccgccaccttctacgaggtcgtcttc
gatgacggctcctacagtgacaacctccttcccgaggacatcgagaaccgggactgtgtc
aagctgggccctccagcagtgggcgacgtggtgcaggtgcgctggacggacaatctgctg
tacggggccaagtttgtcgcatcgcactccatccttatgtaccagatggagtttgaggac
gggtcgtcgttgtctgccaagagggaagatgtctacagtctagatgaggagctgcccaaa
cgagtcaagtcccgaatgtccaaggcgtcagacatgcgcttcgatgggattttcacagag
gaggaggttaagcagggctccaagagacagcgagtcatcaactcccgttacagagaggac
tacatcgagcctctcctatacagagttatgatggagtaa

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