Oncorhynchus nerka (sockeye salmon): 115103285
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Entry
115103285 CDS
T07952
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115103285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115103285
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115103285
Prokaryotic type
Archaeal type
TFB
115103285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
115103285
NCBI-ProteinID:
XP_029479991
LinkDB
All DBs
Position
LG20:65011750..65022467
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AA seq
318 aa
AA seq
DB search
MASTSRGDVLALPKVQCPNHPDAMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATQDPSRVGDAQNPLLNGGDLSTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgcggagatgtcctggcccttcccaaggtgcagtgccccaaccac
ccagatgccatgctggtggaagactacagagcaggggacatgatctgccccgagtgtggc
cttgtagtgggtgacagagtgattgatgtgggttcagagtggaggaccttcaccaatgag
aaagccacccaagacccgtccagagtgggcgacgcccagaatccactcctcaacggggga
gacttgagcaccatgatcagcaagggaacaggcgcggcaagttttgatgagtttggcaac
tccaagtaccagaaccggcggaccatgagcagttcagaccgcgccatgctaaacgccttc
aaagagattaccaccatggctgaccggatcaacctaccaaggaacatcatagaccgaaca
aataacttatttaagcaagtgtacgaacagaagagcctgaaggggcgggccaatgacgcc
atcgcatcagcctgcctctacatcgcctgcagacaagagggtgtgcctcggacatttaaa
gagatctgcgccgtgtcccgtatctccaagaaggagatcggccgctgcttcaagctgatc
ctcaaggccctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgcttc
tgctccaacctaggcctgccgaagcaggtgcagatggcagccacctacatcgcccggaag
gccgtggagctggacctggtgcccggcaggagccccatttctgtggctgccgccgccatc
tacatggcctcccaggcctctgccgagaagaagacccagaaagagattggagacatcgct
ggtgtggcggacgtcacaatcagacagtcgtacagactcatctaccctcgcgctgccgac
ctctttcccccagacttcaaatttgacacccccgtggacaaactgccccagctgtga
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integrated database retrieval system
